RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SOBPA7XYQ1 873 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 DBIP07108 87 aaKnown RBP15.33■□□□□ 0.04
COL17A1-202ENST00000369733 VIPR1P32241 457 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 SEC23BQ15437 767 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 SLC8B1Q6J4K2 584 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 ZNF767PQ75MW2 155 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 VWA5B2Q8N398 1253 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 OR2L3Q8NG85 312 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 OR10T2Q8NGX3 314 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 TM9SF2Q99805 663 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 NLGN3Q9NZ94 848 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 TEX28O15482 410 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 RHCEP18577 417 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 PDHA2P29803 388 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 SLC35F1Q5T1Q4 408 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 IQCF2Q8IXL9 164 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 SLC5A8Q8N695 610 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 YIPF7Q8N8F6 280 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 PROKR2Q8NFJ6 384 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 ASB15Q8WXK1 588 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 IGSF8Q969P0 613 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 PLEKHA1Q9HB21 404 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 FOLH1BQ9HBA9 442 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 FKBP14Q9NWM8 211 aa15.33■□□□□ 0.04
COL17A1-202ENST00000369733 SH3D21A4FU49 640 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 AOC2O75106 756 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 CRHBPP24387 322 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 WASP42768 502 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 EMX1Q04741 257 aaPredicted RBP15.32■□□□□ 0.04
COL17A1-202ENST00000369733 SOX4Q06945 474 aaPredicted RBP15.32■□□□□ 0.04
COL17A1-202ENST00000369733 OR56A1Q8NGH5 318 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 OR6Q1Q8NGQ2 317 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 TRIM43Q96BQ3 446 aaPredicted RBP15.32■□□□□ 0.04
COL17A1-202ENST00000369733 CLDN4O14493 209 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 SCAMP1O15126 338 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 RLN2P04090 185 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 ZNF823P16415 610 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 IGFALSP35858 605 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 FNTBP49356 437 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 KLHL26Q53HC5 615 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 DCP2Q8IU60 420 aaKnown RBP15.32■□□□□ 0.04
COL17A1-202ENST00000369733 TMEM102Q8N9M5 508 aaPredicted RBP15.32■□□□□ 0.04
COL17A1-202ENST00000369733 SHKBP1Q8TBC3 707 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 SLC22A17Q8WUG5 538 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 RAB11FIP5Q9BXF6 653 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 IFT52Q9Y366 437 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 MAGED1Q9Y5V3 778 aaPredicted RBP15.32■□□□□ 0.04
COL17A1-202ENST00000369733 H2AFB2P0C5Z0 115 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 AHCYP23526 432 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 PON3Q15166 354 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 PLEKHS1Q5SXH7 462 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 PLPP4Q5VZY2 271 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 BRAT1Q6PJG6 821 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 OR52E4Q8NGH9 312 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 PSKH2Q96QS6 385 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 MMP28Q9H239 520 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 NOP16Q9Y3C1 178 aaKnown RBP15.32■□□□□ 0.04
COL17A1-202ENST00000369733 A0A0U1RQF3 1178 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 CD8B2A6NJW9 211 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 TEX46H3BTG2 121 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 APOC1P02654 83 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 FCER2P06734 321 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 CD8BP10966 210 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 PREPP48147 710 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 LASP1Q14847 261 aaKnown RBP15.32■□□□□ 0.04
COL17A1-202ENST00000369733 RANBP10Q6VN20 620 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 ZNF227Q86WZ6 799 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 TMEM17Q86X19 198 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 GDPD1Q8N9F7 314 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 IL36AQ9UHA7 158 aa15.32■□□□□ 0.04
COL17A1-202ENST00000369733 NUFIP1Q9UHK0 495 aaKnown RBP15.32■□□□□ 0.04
COL17A1-202ENST00000369733 WRBO00258 174 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 STATHP02808 62 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 HOXD8P13378 290 aaPredicted RBP15.31■□□□□ 0.04
COL17A1-202ENST00000369733 RIPPLY1Q0D2K3 151 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 KCNJ8Q15842 424 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 TMCO2Q7Z6W1 182 aaPredicted RBP15.31■□□□□ 0.04
COL17A1-202ENST00000369733 METTL25Q8N6Q8 603 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 CHDHQ8NE62 594 aaPredicted RBP15.31■□□□□ 0.04
COL17A1-202ENST00000369733 FCAMRQ8WWV6 532 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 ASB12Q8WXK4 309 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 NDUFS4O43181 175 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 CRYZL1O95825 349 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 PRSS56P0CW18 603 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 ACRV1P26436 265 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 TIA1P31483 386 aaKnown RBP eCLIP15.31■□□□□ 0.04
COL17A1-202ENST00000369733 NTRK2Q16620 822 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 B3GNT9Q6UX72 402 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 NOXA1Q86UR1 476 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 PNPLA1Q8N8W4 532 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 CHPT1Q8WUD6 406 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 LRR1Q96L50 414 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 RNF208Q9H0X6 261 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 RGPD2P0DJD1 1756 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 A0A1W2PQL4 384 aaPredicted RBP15.31■□□□□ 0.04
COL17A1-202ENST00000369733 ZNF670-ZNF695F2Z2N8 137 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 MEF2AQ02078 507 aaPredicted RBP15.31■□□□□ 0.04
COL17A1-202ENST00000369733 LRRC32Q14392 662 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 GID4Q8IVV7 300 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 TBC1D15Q8TC07 691 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms