RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TRIM39Q9HCM9 518 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 EPHA6Q9UF33 1036 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 TRHDEQ9UKU6 1024 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 CYP8B1Q9UNU6 501 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 TMEM82A0PJX8 343 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 TLR4O00206 839 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 MEN1O00255 615 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 PLD2O14939 933 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 KHNYNO15037 678 aaKnown RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 SLC22A5O76082 557 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 FTH1P02794 183 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 CKMT2P17540 419 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 CHRM3P20309 590 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 OR1E1P30953 314 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 DEFA1P59665 94 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 DEFA3P59666 94 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 NEDD8Q15843 81 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 BCL7AQ4VC05 210 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 PAGE2BQ5JRK9 111 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 LDLRAP1Q5SW96 308 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 SULT1C3Q6IMI6 304 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 SDE2Q6IQ49 451 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 RFLNAQ6ZTI6 216 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 RDH10Q8IZV5 341 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 NLGN4XQ8N0W4 816 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF366Q8N895 744 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 SPATA22Q8NHS9 363 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 SNIP1Q8TAD8 396 aaKnown RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 GANCQ8TET4 914 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 AP2M1Q96CW1 435 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 REPS1Q96D71 796 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 CAMK1GQ96NX5 476 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 MNTQ99583 582 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ELF4Q99607 663 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 GAL3ST1Q99999 423 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ALOXE3Q9BYJ1 711 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 P2RY12Q9H244 342 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 NT5MQ9NPB1 228 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 HMX2A2RU54 273 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 LOC110117498-PIK3R3F6TDL0 507 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 TFECO14948 347 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 H2AFYO75367 372 aaKnown RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 LDOC1O95751 146 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 TGM6O95932 706 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ANKRD34CP0C6C1 535 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ITGAMP11215 1152 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 NUDT2P50583 147 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 PCLAFQ15004 111 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 POLD3Q15054 466 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF385CQ66K41 422 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 IL31Q6EBC2 164 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 NAPRTQ6XQN6 538 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 CLEC4FQ8N1N0 589 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 DHRSXQ8N5I4 330 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 BPIFB6Q8NFQ5 453 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 OR13H1Q8NG92 308 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 OR7A2PQ8NGA2 310 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 OR6P1Q8NGX9 317 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 AGR3Q8TD06 166 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 RAD51AP1Q96B01 352 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ZHX1-C8orf76Q96EF9 292 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 AGAP2Q99490 1192 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 EBNA1BP2Q99848 306 aaKnown RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 TCEAL2Q9H3H9 227 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 MUC13Q9H3R2 512 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 SUV39H2Q9H5I1 410 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 EIF2B3Q9NR50 452 aaKnown RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ACSL5Q9ULC5 683 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 TBC1D24Q9ULP9 559 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ARHGEF17Q96PE2 2063 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 CXorf49A8MYA2 514 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 BCAT2O15382 392 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 PSIP1O75475 530 aaKnown RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 MT-CYBP00156 380 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 RRASP10301 218 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 ARRB2P32121 409 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 MAGEA12P43365 314 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 FASLGP48023 281 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 SERPINB9P50453 376 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 RPS21P63220 83 aaKnown RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 CERCAMQ5T4B2 595 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 LCN8Q6JVE9 175 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 TIGD7Q6NT04 549 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 SHQ1Q6PI26 577 aaKnown RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 IL27RAQ6UWB1 636 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 PLEKHM3Q6ZWE6 761 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 RHOUQ7L0Q8 258 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 CBR4Q8N4T8 237 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 FAR1Q8WVX9 515 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 HSPA12BQ96MM6 686 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 APOL4Q9BPW4 351 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 FICDQ9BVA6 458 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 CINPQ9BW66 212 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 SLC25A51Q9H1U9 297 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 INTS10Q9NVR2 710 aaKnown RBP6.56□□□□□ -1.36
CSDE1-204ENST00000369530 TAS2R9Q9NYW1 312 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 ABCD2Q9UBJ2 740 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 BOLA1Q9Y3E2 137 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 PCDHB3Q9Y5E6 796 aa6.56□□□□□ -1.36
CSDE1-204ENST00000369530 A0A1W2PRG6 482 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms