RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 DCUN1D3Q8IWE4 304 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 KLHDC8AQ8IYD2 350 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 PGAM4Q8N0Y7 254 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 FBXW8Q8N3Y1 598 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 LIX1Q8N485 282 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 RNF148Q8N7C7 305 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 MAGEC3Q8TD91 643 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 ADAMTS17Q8TE56 1095 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 NEIL2Q969S2 332 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 VPS33AQ96AX1 596 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 C12orf66Q96MD2 445 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 FRG2BQ96QU4 278 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 FERD3LQ96RJ6 166 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 INSM2Q96T92 566 aaPredicted RBP9.48□□□□□ -0.89
TPM3-210ENST00000368530 MAP3K3Q99759 626 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 GPR87Q9BY21 358 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 BRINP2Q9C0B6 783 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 CCDC177Q9NQR7 707 aaPredicted RBP9.48□□□□□ -0.89
TPM3-210ENST00000368530 IMP3Q9NV31 184 aaKnown RBP9.48□□□□□ -0.89
TPM3-210ENST00000368530 ADA2Q9NZK5 511 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 NOP53Q9NZM5 478 aaKnown RBP9.48□□□□□ -0.89
TPM3-210ENST00000368530 NKX1-2Q9UD57 310 aaPredicted RBP9.48□□□□□ -0.89
TPM3-210ENST00000368530 EIF3LQ9Y262 564 aaKnown RBP9.48□□□□□ -0.89
TPM3-210ENST00000368530 ITPR2Q14571 2701 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 CROCCQ5TZA2 2017 aa9.48□□□□□ -0.89
TPM3-210ENST00000368530 MYO9AB2RTY4 2548 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 TTLL8A6PVC2 850 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 E7ENX8 843 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 ZFP36L2P47974 494 aaKnown RBP9.47□□□□□ -0.89
TPM3-210ENST00000368530 POLR2JP52435 117 aaKnown RBP9.47□□□□□ -0.89
TPM3-210ENST00000368530 CHAF1BQ13112 559 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 RPE65Q16518 533 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 TRMT5Q32P41 509 aaKnown RBP9.47□□□□□ -0.89
TPM3-210ENST00000368530 TIGD2Q4W5G0 525 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 LIPJQ5W064 366 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 ADNP2Q6IQ32 1131 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 GRHL2Q6ISB3 625 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 LCN10Q6JVE6 187 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 PGM2L1Q6PCE3 622 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 BLOC1S3Q6QNY0 202 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 BPHLQ86WA6 291 aaPredicted RBP9.47□□□□□ -0.89
TPM3-210ENST00000368530 D2HGDHQ8N465 521 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 Q8NA96 180 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 HIPK4Q8NE63 616 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 OR5K2Q8NHB8 316 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 CLHC1Q8NHS4 586 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 CPT1CQ8TCG5 803 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 THAP4Q8WY91 577 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 STMN2Q93045 179 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 RAD51AP1Q96B01 352 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 CXorf40BQ96DE9 158 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 SPDL1Q96EA4 605 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 SLC39A3Q9BRY0 314 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 ACAT2Q9BWD1 397 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 PDE7BQ9NP56 450 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 FGF21Q9NSA1 209 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 C1orf109Q9NX04 203 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 NDE1Q9NXR1 346 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 ZIM2Q9NZV7 527 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 RARRES3Q9UL19 164 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 ACSL5Q9ULC5 683 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 PRPF19Q9UMS4 504 aaKnown RBP9.47□□□□□ -0.89
TPM3-210ENST00000368530 FARSAQ9Y285 508 aaKnown RBP9.47□□□□□ -0.89
TPM3-210ENST00000368530 NDUFAF1Q9Y375 327 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 KCNE2Q9Y6J6 123 aa9.47□□□□□ -0.89
TPM3-210ENST00000368530 PRRC2CQ9Y520 2896 aaKnown RBP9.47□□□□□ -0.89
TPM3-210ENST00000368530 FAM234BA2RU67 622 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 CCDC154A6NI56 674 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 BBIP1A8MTZ0 92 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 UGDHO60701 494 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 KCNJ13O60928 360 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 RSL1D1O76021 490 aaKnown RBP9.46□□□□□ -0.89
TPM3-210ENST00000368530 RPN2P04844 631 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 NPPBP16860 134 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 GNAZP19086 355 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 TCN1P20061 433 aaPredicted RBP9.46□□□□□ -0.89
TPM3-210ENST00000368530 HNF4AP41235 474 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 DGKQP52824 942 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 MEF2AQ02078 507 aaPredicted RBP9.46□□□□□ -0.89
TPM3-210ENST00000368530 TAP2Q03519 686 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 MAD2L1Q13257 205 aaPredicted RBP9.46□□□□□ -0.89
TPM3-210ENST00000368530 CEACAM7Q14002 265 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 CAPRIN1Q14444 709 aaKnown RBP9.46□□□□□ -0.89
TPM3-210ENST00000368530 SLBPQ14493 270 aaKnown RBP eCLIP9.46□□□□□ -0.89
TPM3-210ENST00000368530 KRT33BQ14525 404 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 PTGR1Q14914 329 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 FHL5Q5TD97 284 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 PRAMEF13Q5VWM6 474 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 SLCO4C1Q6ZQN7 724 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 RNF165Q6ZSG1 346 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 KMT5CQ86Y97 462 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 LRRC56Q8IYG6 542 aaPredicted RBP9.46□□□□□ -0.89
TPM3-210ENST00000368530 PCYOX1LQ8NBM8 494 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 PROKR1Q8TCW9 393 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 SLC5A11Q8WWX8 675 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 ZNF501Q96CX3 271 aaPredicted RBP9.46□□□□□ -0.89
TPM3-210ENST00000368530 CMTM7Q96FZ5 175 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 APIPQ96GX9 242 aa9.46□□□□□ -0.89
TPM3-210ENST00000368530 MAGEB10Q96LZ2 347 aaPredicted RBP9.46□□□□□ -0.89
TPM3-210ENST00000368530 MTERF1Q99551 399 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms