RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 IRF3Q14653 427 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 PGS1Q32NB8 556 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 TPRG1LQ5T0D9 272 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 GPRC6AQ5T6X5 926 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 CCDC81Q6ZN84 652 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 TAS2R42Q7RTR8 314 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 ZNF367Q7RTV3 350 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 DSG4Q86SJ6 1040 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 CIR1Q86X95 450 aaPredicted RBP11.05□□□□□ -0.64
USF1-201ENST00000368019 ZSWIM9Q86XI8 627 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 PHACTR4Q8IZ21 702 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 DNAJC22Q8N4W6 341 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 L3MBTL4Q8NA19 623 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 OR8J2Q8NGG1 315 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 PSMA8Q8TAA3 256 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 APH1BQ8WW43 257 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 ZCCHC14Q8WYQ9 949 aaKnown RBP11.05□□□□□ -0.64
USF1-201ENST00000368019 TMEM131Q92545 1883 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 FOXJ1Q92949 421 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 BHMTQ93088 406 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 ZNF486Q96H40 463 aaPredicted RBP11.05□□□□□ -0.64
USF1-201ENST00000368019 CAMK1GQ96NX5 476 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 SNX18Q96RF0 628 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 EGFL8Q99944 293 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 OR2B2Q9GZK3 357 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 MKRN2Q9H000 416 aaKnown RBP11.05□□□□□ -0.64
USF1-201ENST00000368019 PDP1Q9P0J1 537 aaPredicted RBP11.05□□□□□ -0.64
USF1-201ENST00000368019 KIF17Q9P2E2 1029 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 SUSD2Q9UGT4 822 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 ABCG2Q9UNQ0 655 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 PADI2Q9Y2J8 665 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 GOLGA4Q13439 2230 aaKnown RBP11.05□□□□□ -0.64
USF1-201ENST00000368019 ADAMTS20P59510 1910 aa11.05□□□□□ -0.64
USF1-201ENST00000368019 APC2O95996 2303 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 KNTC1P50748 2209 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 MUC22E2RYF6 1773 aaPredicted RBP11.04□□□□□ -0.64
USF1-201ENST00000368019 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.04□□□□□ -0.64
USF1-201ENST00000368019 A0A0D9SEW6 157 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 CLCA1A8K7I4 914 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 AGAP14A8MT82 685 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 M0R082 166 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 RFXANKO14593 260 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 ADAMDEC1O15204 470 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 SH3BP5O60239 455 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 MPZL2O60487 215 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 MPC1LP0DKB6 136 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 HSD3B1P14060 373 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 HSD3B2P26439 372 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 MAOBP27338 520 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 IL12RB1P42701 662 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 KIR3DL1P43629 444 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 CSNK1DP48730 415 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 PRIM2P49643 509 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 PCDH1Q08174 1060 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 CSTF3Q12996 717 aaKnown RBP11.04□□□□□ -0.64
USF1-201ENST00000368019 ZNF177Q13360 481 aaPredicted RBP11.04□□□□□ -0.64
USF1-201ENST00000368019 TEAD4Q15561 434 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 CLPPQ16740 277 aaPredicted RBP11.04□□□□□ -0.64
USF1-201ENST00000368019 IQCCQ4KMZ1 466 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 ZNF544Q6NX49 715 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 C19orf48Q6RUI8 117 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 KIAA1324Q6UXG2 1013 aaKnown RBP11.04□□□□□ -0.64
USF1-201ENST00000368019 DNAJC14Q6Y2X3 702 aaPredicted RBP11.04□□□□□ -0.64
USF1-201ENST00000368019 GDPGP1Q6ZNW5 385 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 CAMKMTQ7Z624 323 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 SERPINA9Q86WD7 417 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 FAM217AQ8IXS0 508 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 ENTHD1Q8IYW4 607 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 CPXM2Q8N436 756 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 KRTCAP2Q8N6L1 136 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 POC5Q8NA72 575 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 CADM4Q8NFZ8 388 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 C1orf216Q8TAB5 229 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 C17orf50Q8WW18 174 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 COPS4Q9BT78 406 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 ALOXE3Q9BYJ1 711 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 ACPTQ9BZG2 426 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 CIPCQ9C0C6 399 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 C3orf14Q9HBI5 128 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 SARS2Q9NP81 518 aaKnown RBP11.04□□□□□ -0.64
USF1-201ENST00000368019 CCDC177Q9NQR7 707 aaPredicted RBP11.04□□□□□ -0.64
USF1-201ENST00000368019 THUMPD1Q9NXG2 353 aaKnown RBP11.04□□□□□ -0.64
USF1-201ENST00000368019 KCTD5Q9NXV2 234 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 CNOT2Q9NZN8 540 aaKnown RBP11.04□□□□□ -0.64
USF1-201ENST00000368019 CRNNQ9UBG3 495 aaPredicted RBP11.04□□□□□ -0.64
USF1-201ENST00000368019 LHX3Q9UBR4 397 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 CLEC4EQ9ULY5 219 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 CFL2Q9Y281 166 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 POFUT2Q9Y2G5 429 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 LYVE1Q9Y5Y7 322 aa11.04□□□□□ -0.64
USF1-201ENST00000368019 TP53BP1Q12888 1972 aaPredicted RBP11.03□□□□□ -0.64
USF1-201ENST00000368019 IGSF10Q6WRI0 2623 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 CXorf51AA0A1B0GTR3 108 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.03□□□□□ -0.64
USF1-201ENST00000368019 SH3D21A4FU49 640 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 ARRDC5A6NEK1 342 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 CLIC1O00299 241 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 PCDHGA12O60330 932 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 KCNK2O95069 426 aa11.03□□□□□ -0.64
USF1-201ENST00000368019 LCKP06239 509 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms