RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ARL9Q6T311 187 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 SDR16C5Q8N3Y7 309 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 HAVCR2Q8TDQ0 301 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 MUL1Q969V5 352 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 RHBDF1Q96CC6 855 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 OR51V1Q9H2C8 321 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 SOX17Q9H6I2 414 aaPredicted RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ELAC1Q9H777 363 aaKnown RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 WDR26Q9H7D7 661 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 NDOR1Q9UHB4 597 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 MED31Q9Y3C7 131 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 PTGESO14684 152 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 EPHX1P07099 455 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 JUNBP17275 347 aaPredicted RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 GRSF1Q12849 480 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 CLEC12AQ5QGZ9 265 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 IGFN1Q86VF2 1251 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 NRSN1Q8IZ57 195 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ATP6V1C2Q8NEY4 427 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 GPR151Q8TDV0 419 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 SLA2Q9H6Q3 261 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ENAMQ9NRM1 1142 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 PTTG3PQ9NZH4 202 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 CD9P21926 228 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 PCDH1Q08174 1060 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 GDF6Q6KF10 455 aaPredicted RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 OR10T2Q8NGX3 314 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 C1orf216Q8TAB5 229 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZNF431Q8TF32 576 aaPredicted RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 HYLS1Q96M11 299 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 CDH7Q9ULB5 785 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 DIRAS1O95057 198 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 TGFB1P01137 390 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 IL3P08700 152 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ACADLP28330 430 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ACTA2P62736 377 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ACTG2P63267 376 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 PRSS55Q6UWB4 352 aaPredicted RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 MRPL10Q7Z7H8 261 aaKnown RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 DCP2Q8IU60 420 aaKnown RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 CHDHQ8NE62 594 aaPredicted RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 SRRDQ9UH36 339 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ENPP4Q9Y6X5 453 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 CACNA1IQ9P0X4 2223 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 MATN1P21941 496 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ILF3Q12906 894 aaKnown RBP eCLIP11.34□□□□□ -0.593e-7■■■■■ 31.9
CDC42BPA-202ENST00000366764 CEP76Q8TAP6 659 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 DUS3LQ96G46 650 aaKnown RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 PCDHA9Q9Y5H5 950 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 FAM25EA8MYX2 175 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZBTB42B2RXF5 422 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 TEX46H3BTG2 121 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 RENP00797 406 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 TMEM236Q5W0B7 351 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZNF227Q86WZ6 799 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 PM20D2Q8IYS1 436 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 RNF31Q96EP0 1072 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ATOH8Q96SQ7 321 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 A0A1B0GVI7 797 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 M0R233 179 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 APLP1P51693 650 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 PON3Q15166 354 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 IGSF8Q969P0 613 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 TMEM203Q969S6 136 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 SLC12A9Q9BXP2 914 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 RRAGCQ9HB90 399 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 LRRC72A6NJI9 287 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 GINS1Q14691 196 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 MAVSQ7Z434 540 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 OR52N2Q8NGI0 321 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 OR6K6Q8NGW6 343 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 OR5AK3PQ8NH89 298 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 MAELQ96JY0 434 aaKnown RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 TM9SF2Q99805 663 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 BRD7Q9NPI1 651 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 UCKL1Q9NWZ5 548 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 SOHLH2Q9NX45 425 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 DICER1Q9UPY3 1922 aaKnown RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 RNASET2O00584 256 aaKnown RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 ERI3O43414 337 aaKnown RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 NT5EP21589 574 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 EIF2DP41214 584 aaKnown RBP11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 DNASE1L1P49184 302 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 NCS1P62166 190 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 GRHL2Q6ISB3 625 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 SLC25A24Q6NUK1 477 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 LETMD1Q6P1Q0 360 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 CAMKVQ8NCB2 501 aa11.34□□□□□ -0.59
CDC42BPA-202ENST00000366764 SVILO95425 2214 aa11.33□□□□□ -0.59
CDC42BPA-202ENST00000366764 TBC1D3DA0A087WVF3 549 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TBC1D3IA0A087WXS9 549 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TBC1D3EA0A087X179 549 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TBC1D3KA0A087X1G2 549 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TBC1D3FA6NER0 549 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TBC1D3LB9A6J9 549 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TPST2O60704 377 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 VIPP01282 170 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TBC1D3HP0C7X1 549 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TBC1D3GQ6DHY5 549 aa11.33□□□□□ -0.6
CDC42BPA-202ENST00000366764 TBC1D3CQ6IPX1 549 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms