RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 XRCC3O43542 346 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 SAP30O75446 220 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 MED24O75448 989 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 OR6A2O95222 327 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 BAG3O95817 575 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 SLC25A27O95847 323 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 INSP01308 110 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 MYL3P08590 195 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 SNRPCP09234 159 aaKnown RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 OR9G9P0C7N8 305 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 LAMP1P11279 417 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 VPREB1P12018 145 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 CYP11B1P15538 503 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 PDGFRAP16234 1089 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 HTR1EP28566 365 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 PPP2R1AP30153 589 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 UGT1A3P35503 534 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 TGFBR1P36897 503 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 POU3F4P49335 361 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 VAMP7P51809 220 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 RARSP54136 660 aaKnown RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 AK2P54819 239 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 FLI1Q01543 452 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 GOLGA8DPQ0D2H9 430 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 GALNT1Q10472 559 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 PTP4A2Q12974 167 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 CSTF3Q12996 717 aaKnown RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 MADCAM1Q13477 382 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 KRT33BQ14525 404 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 NONOQ15233 471 aaKnown RBP eCLIP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 CCNG2Q16589 344 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 ZNF630Q2M218 657 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 DEFB116Q30KQ4 102 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 RARS2Q5T160 578 aaKnown RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 DCST2Q5T1A1 773 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 ANO1Q5XXA6 986 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 ARHGAP22Q7Z5H3 698 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 DND1Q8IYX4 353 aaKnown RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 TMEM99Q8N816 258 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 CYB561D1Q8N8Q1 229 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 GBP7Q8N8V2 638 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 RASGEF1AQ8N9B8 481 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 OR2AJ1Q8NGZ0 328 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 TFB1MQ8WVM0 346 aaKnown RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 TIFAQ96CG3 184 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 LBHD1Q9BQE6 289 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 REEP2Q9BRK0 252 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 PELOQ9BRX2 385 aaKnown RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 ZNF649Q9BS31 505 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 NAA15Q9BXJ9 866 aaKnown RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 GLIPR2Q9H4G4 154 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 PTGES2Q9H7Z7 377 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 JMJD4Q9H9V9 463 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 LHX9Q9NQ69 397 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 PIGVQ9NUD9 493 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 PRMT7Q9NVM4 692 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 TAS2R14Q9NYV8 317 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 CNOT8Q9UFF9 292 aaKnown RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 ANGPTL2Q9UKU9 493 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 MKLN1Q9UL63 735 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 CORO1CQ9ULV4 474 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 LRCH1Q9Y2L9 728 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 YTHDF2Q9Y5A9 579 aaKnown RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 PCDHGA5Q9Y5G8 931 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 MTCL1Q9Y4B5 1905 aaKnown RBP-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 ZNF407Q9C0G0 2248 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 PLEKHG1Q9ULL1 1385 aa-0.33□□□□□ -2.46
RNU6-54P-201ENST00000365563 IGLV3-12A0A075B6K2 115 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 IGHV3OR16-12A0A075B7B8 117 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 IGKV2-29A2NJV5 120 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 A8MVM7 634 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 PSMD3O43242 534 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 PIP5K1CO60331 668 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 PAGE4O60829 102 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 CTDNEP1O95476 244 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 CSTBP04080 98 aaKnown RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 FCGR3AP08637 254 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 PDGFRBP09619 1106 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 IFIT1P09914 478 aaKnown RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 SBK2P0C263 348 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 OR2T7P0C7T2 308 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 IRF2P14316 349 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 NPR2P20594 1047 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 UQCRC2P22695 453 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 CD1BP29016 333 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 DLSTP36957 453 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 TGFBR2P37173 567 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 FEN1P39748 380 aaKnown RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 HADHAP40939 763 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 CACNA1DQ01668 2161 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 COL7A1Q02388 2944 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 RBBP4Q09028 425 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 KLHL30Q0D2K2 578 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 FRG1Q14331 258 aaKnown RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 SYPL1Q16563 259 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 UBE2SQ16763 222 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 RFTN2Q52LD8 501 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 FAM98BQ52LJ0 330 aaKnown RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 SBK1Q52WX2 424 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 SYT14P1Q58G82 188 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms