RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TSPY8P0CW00 308 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 RPL9P32969 192 aaKnown RBP3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 ID1P41134 155 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 TRA2BP62995 288 aaKnown RBP3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 RPP38P78345 283 aaKnown RBP3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 NDPQ00604 133 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 TSPY1Q01534 308 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 CDO1Q16878 200 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 ZNF506Q5JVG8 444 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 SPOUT1Q5T280 376 aaKnown RBP3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 RNLSQ5VYX0 342 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 PM20D1Q6GTS8 502 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 TBC1D10CQ8IV04 446 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 UXS1Q8NBZ7 420 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 PCNPQ8WW12 178 aaKnown RBP3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 RUNDC3BQ96NL0 473 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 GBP5Q96PP8 586 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 SLC39A8Q9C0K1 460 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 LSG1Q9H089 658 aaKnown RBP3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 SLITRK2Q9H156 845 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 SH3GLB2Q9NR46 395 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 ABCB10Q9NRK6 738 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 FAM212BQ9NTI7 297 aaPredicted RBP3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 FBXO7Q9Y3I1 522 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 NAALAD2Q9Y3Q0 740 aa3.4□□□□□ -1.87
RNU4-28P-201ENST00000364739 A0A1W2PNU3 283 aaPredicted RBP3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 IGHG1P01857 330 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 RLN1P04808 185 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 HCKP08631 526 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 GP5P40197 560 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 ELK3P41970 407 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 MATKP42679 507 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 NPBWR1P48145 328 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 ATAD3CQ5T2N8 411 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 TMUB2Q71RG4 321 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 PHLDB2Q86SQ0 1253 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 OR6T1Q8NGN1 323 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 SEPT8Q92599 483 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 RFT1Q96AA3 541 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 ANKRD27Q96NW4 1050 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 UBE2TQ9NPD8 197 aaPredicted RBP3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 TNFRSF19Q9NS68 423 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 CLEC5AQ9NY25 188 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 ABCD2Q9UBJ2 740 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 MGAT4AQ9UM21 535 aa3.39□□□□□ -1.87
RNU4-28P-201ENST00000364739 LYNP07948 512 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 ADARP55265 1226 aaKnown RBP3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 RUNX3Q13761 415 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 SLC22A6Q4U2R8 563 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 PLPP4Q5VZY2 271 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 TMEM64Q6YI46 380 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 SLC34A3Q8N130 599 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 PNNQ9H307 717 aaKnown RBP3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 TERF2IPQ9NYB0 399 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 ARMCX1Q9P291 453 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 B4GALT7Q9UBV7 327 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 SPATA2Q9UM82 520 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 CELA1Q9UNI1 258 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 CPQQ9Y646 472 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 POMT1Q9Y6A1 747 aa3.38□□□□□ -1.87
RNU4-28P-201ENST00000364739 POGZQ7Z3K3 1410 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 C2orf92A0A1B0GVN3 265 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 ILVBLA1L0T0 632 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 OR5H15A6NDH6 313 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 SCO2O43819 266 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 ZNF253O75346 499 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 NME6O75414 186 aaPredicted RBP3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 FGF19O95750 216 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 SKILP12757 684 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 ACKR3P25106 362 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 SPRP35270 261 aaPredicted RBP3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 TFCP2Q12800 502 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 GPR50Q13585 617 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 CCL14Q16627 93 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 Q1RN00 199 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 RFTN2Q52LD8 501 aaPredicted RBP3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 MPP7Q5T2T1 576 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 LYPLAL1Q5VWZ2 237 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 RFWD3Q6PCD5 774 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 PODNL1Q6PEZ8 512 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 SIGLEC15Q6ZMC9 328 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 METTL23Q86XA0 190 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 KRTAP11-1Q8IUC1 163 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 LRRC49Q8IUZ0 686 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 CCDC71Q8IV32 467 aaPredicted RBP3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 ELMOD1Q8N336 334 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 DNASE1L2Q92874 299 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 SERAC1Q96JX3 654 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 CNOT6LQ96LI5 555 aaKnown RBP3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 ERGIC2Q96RQ1 377 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 HSD17B14Q9BPX1 270 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 APOL2Q9BQE5 337 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 ATG101Q9BSB4 218 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 ZNF665Q9H7R5 613 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 UBQLN2Q9UHD9 624 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 ETV7Q9Y603 341 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 NOTCH2Q04721 2471 aa3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 TDRD6O60522 2096 aaKnown RBP3.37□□□□□ -1.87
RNU4-28P-201ENST00000364739 ZNF724A8MTY0 619 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms