RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 C4BPBP20851 252 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 RABIFP47224 123 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 KCNK10P57789 538 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 SSTP61278 116 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 C3AR1Q16581 482 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 ADAMTSL4-AS1Q5T5F5 129 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 RUSC1-AS1Q66K80 236 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 CAPN13Q6MZZ7 669 aaPredicted RBP3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 TAF8Q7Z7C8 310 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 C17orf64Q86WR6 236 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 ERC1Q8IUD2 1116 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 ELMOD1Q8N336 334 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 DDHD1Q8NEL9 900 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 C8orf46Q8TAG6 207 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 MRPL38Q96DV4 380 aaKnown RBP3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 ZNF486Q96H40 463 aaPredicted RBP3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 MAGED4Q96JG8 741 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 LRR1Q96L50 414 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 NSMCE2Q96MF7 247 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 MTHFD2LQ9H903 347 aaPredicted RBP3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 ATAD3AQ9NVI7 634 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 TMEM181Q9P2C4 612 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 PROCRQ9UNN8 238 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 PLEKHA6Q9Y2H5 1048 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 PYGO1Q9Y3Y4 419 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 ANGPTL3Q9Y5C1 460 aa3.23□□□□□ -1.89
RNU6-28P-201ENST00000362378 FGD5Q6ZNL6 1462 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 UBE4BO95155 1302 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 MEIOCA2RUB1 952 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 GLTPD2A6NH11 291 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 IFITM10A6NMD0 228 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 KRTAP29-1A8MX34 341 aaPredicted RBP3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 TCP10L2B9ZVM9 353 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 RASGRF2O14827 1237 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 TLX2O43763 284 aaPredicted RBP3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 ECE2O60344 883 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 GMNNO75496 209 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 ANGPTL1O95841 491 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 MT-ATP6P00846 226 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 PTMAP06454 111 aaKnown RBP3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 SP1P08047 785 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 GLRA1P23415 457 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 GIFP27352 417 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 TNFRSF4P43489 277 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 PITPNBP48739 271 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 BACE1P56817 501 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 BTG1P62324 171 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 HERV-K104P63124 156 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 HSPA14Q0VDF9 509 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 DRP2Q13474 957 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 HNRNPDQ14103 355 aaKnown RBP3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 MTF1Q14872 753 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 HEPACAMQ14CZ8 416 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 KRT31Q15323 416 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 OR1C1Q15619 314 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 CCDC40Q4G0X9 1142 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 NKAIN2Q5VXU1 208 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 OR6B2Q6IFH4 312 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 WDR88Q6ZMY6 472 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 RBM43Q6ZSC3 357 aaKnown RBP3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 Q6ZSR9 355 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 NOTCH2NLQ7Z3S9 236 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 CUZD1Q86UP6 607 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 NR2C2APQ86WQ0 139 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 CATSPERDQ86XM0 798 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 CACUL1Q86Y37 369 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 ANKRD20A12PQ8NF67 263 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 OR4L1Q8NH43 312 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 TAF4BQ92750 862 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 ESAMQ96AP7 390 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 TBC1D31Q96DN5 1066 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 MRPL53Q96EL3 112 aaKnown RBP3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 C14orf79Q96F83 325 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 SAMD8Q96LT4 415 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 ZNF300Q96RE9 604 aaPredicted RBP3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 ERGIC2Q96RQ1 377 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 KCNK16Q96T55 309 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 KRT12Q99456 494 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 AGPAT1Q99943 283 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 OVOL2Q9BRP0 275 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 KRT23Q9C075 422 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 WDR13Q9H1Z4 485 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 S100A14Q9HCY8 104 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 INTS10Q9NVR2 710 aaKnown RBP3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 HPF1Q9NWY4 346 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 ACTR3BQ9P1U1 418 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 EPS15L1Q9UBC2 864 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 FAM153AQ9UHL3 310 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 NARFQ9UHQ1 456 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 PPP1R3CQ9UQK1 317 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 LRP12Q9Y561 859 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 OR1A2Q9Y585 309 aa3.22□□□□□ -1.89
RNU6-28P-201ENST00000362378 A0A087X002 238 aa3.21□□□□□ -1.9
RNU6-28P-201ENST00000362378 ANHXE9PGG2 379 aa3.21□□□□□ -1.9
RNU6-28P-201ENST00000362378 NPIPB9F8W1W9 429 aa3.21□□□□□ -1.9
RNU6-28P-201ENST00000362378 SIGLEC5O15389 551 aa3.21□□□□□ -1.9
RNU6-28P-201ENST00000362378 TXNL1O43396 289 aa3.21□□□□□ -1.9
RNU6-28P-201ENST00000362378 SSX5O60225 188 aa3.21□□□□□ -1.9
RNU6-28P-201ENST00000362378 LRP3O75074 770 aa3.21□□□□□ -1.9
RNU6-28P-201ENST00000362378 CSDE1O75534 798 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms