RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ZNF776Q68DI1 518 aaPredicted RBP21.58■■□□□ 1.05
LDB1-201ENST00000361198 TSPYL5Q86VY4 417 aaPredicted RBP21.58■■□□□ 1.05
LDB1-201ENST00000361198 LINC01555Q8NAE3 123 aa21.58■■□□□ 1.05
LDB1-201ENST00000361198 GANCQ8TET4 914 aa21.58■■□□□ 1.05
LDB1-201ENST00000361198 SMPDL3AQ92484 453 aa21.58■■□□□ 1.05
LDB1-201ENST00000361198 PRAP1Q96NZ9 151 aa21.58■■□□□ 1.05
LDB1-201ENST00000361198 INSM2Q96T92 566 aaPredicted RBP21.58■■□□□ 1.05
LDB1-201ENST00000361198 ZNF717Q9BY31 904 aaPredicted RBP21.58■■□□□ 1.05
LDB1-201ENST00000361198 RHBGQ9H310 441 aa21.58■■□□□ 1.05
LDB1-201ENST00000361198 SLC28A3Q9HAS3 691 aa21.58■■□□□ 1.05
LDB1-201ENST00000361198 PELI2Q9HAT8 420 aa21.58■■□□□ 1.05
LDB1-201ENST00000361198 WASH6PQ9NQA3 447 aa21.58■■□□□ 1.05
LDB1-201ENST00000361198 PHPT1Q9NRX4 125 aaPredicted RBP21.58■■□□□ 1.05
LDB1-201ENST00000361198 ACSL6Q9UKU0 697 aa21.58■■□□□ 1.05
LDB1-201ENST00000361198 ACSL5Q9ULC5 683 aa21.58■■□□□ 1.05
LDB1-201ENST00000361198 GPR89AB7ZAQ6 455 aa21.58■■□□□ 1.04
LDB1-201ENST00000361198 RTCAO00442 366 aaKnown RBP21.58■■□□□ 1.04
LDB1-201ENST00000361198 GPR89BP0CG08 455 aa21.58■■□□□ 1.04
LDB1-201ENST00000361198 IDUAP35475 653 aa21.58■■□□□ 1.04
LDB1-201ENST00000361198 MLF2Q15773 248 aaPredicted RBP21.58■■□□□ 1.04
LDB1-201ENST00000361198 FAM180BQ6P0A1 224 aa21.58■■□□□ 1.04
LDB1-201ENST00000361198 C11orf65Q8NCR3 313 aa21.58■■□□□ 1.04
LDB1-201ENST00000361198 YIPF6Q96EC8 236 aa21.58■■□□□ 1.04
LDB1-201ENST00000361198 C12orf66Q96MD2 445 aa21.58■■□□□ 1.04
LDB1-201ENST00000361198 F2RL3Q96RI0 385 aa21.58■■□□□ 1.04
LDB1-201ENST00000361198 APOL4Q9BPW4 351 aa21.58■■□□□ 1.04
LDB1-201ENST00000361198 AIF1LQ9BQI0 150 aa21.58■■□□□ 1.04
LDB1-201ENST00000361198 SLC6A16Q9GZN6 736 aa21.58■■□□□ 1.04
LDB1-201ENST00000361198 SCN3BQ9NY72 215 aa21.58■■□□□ 1.04
LDB1-201ENST00000361198 TMEM229AB2RXF0 380 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 E9PQ18 207 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 TEAD1P28347 426 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 PCGF2P35227 344 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 OCA2Q04671 838 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 ZNF846Q147U1 533 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 IQCCQ4KMZ1 466 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 DEPDC1Q5TB30 811 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 TTC29Q8NA56 475 aaPredicted RBP21.57■■□□□ 1.04
LDB1-201ENST00000361198 OR5AK3PQ8NH89 298 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 OR14C36Q8NHC7 312 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 ITFG2Q969R8 447 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 MTERF3Q96E29 417 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 FERD3LQ96RJ6 166 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 C1QTNF2Q9BXJ5 285 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 ASPSCR1Q9BZE9 553 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 KCNK6Q9Y257 313 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 GMPPBQ9Y5P6 360 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 ZSCAN9O15535 394 aaPredicted RBP21.57■■□□□ 1.04
LDB1-201ENST00000361198 PORP16435 677 aaPredicted RBP21.57■■□□□ 1.04
LDB1-201ENST00000361198 RPS21P63220 83 aaKnown RBP21.57■■□□□ 1.04
LDB1-201ENST00000361198 DMPKQ09013 629 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 SGCGQ13326 291 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 ITGADQ13349 1161 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 KHDRBS2Q5VWX1 349 aaKnown RBP21.57■■□□□ 1.04
LDB1-201ENST00000361198 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.57■■□□□ 1.04
LDB1-201ENST00000361198 TMEM121BQ9BXQ6 578 aaPredicted RBP21.57■■□□□ 1.04
LDB1-201ENST00000361198 AKIP1Q9NQ31 210 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 TAS2R9Q9NYW1 312 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 PDP1Q9P0J1 537 aaPredicted RBP21.57■■□□□ 1.04
LDB1-201ENST00000361198 SPATA7Q9P0W8 599 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 TAAR2Q9P1P5 351 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 PLEKHM1Q9Y4G2 1056 aa21.57■■□□□ 1.04
LDB1-201ENST00000361198 EYSQ5T1H1 3165 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 A0A1W2PQU0 124 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 TNFRSF21O75509 655 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 CYP4B1P13584 511 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 TNFRSF4P43489 277 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 BCAP31P51572 246 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 CCR8P51685 355 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 KCNJ10P78508 379 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 RELAQ04206 551 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 ATP1A4Q13733 1029 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 ADPRMQ3LIE5 342 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 NIPAL1Q6NVV3 410 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 FAHD1Q6P587 224 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 IKBIPQ70UQ0 350 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 OR52N2Q8NGI0 321 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 C7orf34Q96L11 122 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 MS4A8Q9BY19 250 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 HMG20AQ9NP66 347 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 MIEF1Q9NQG6 463 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 AHSPQ9NZD4 102 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 MSRAQ9UJ68 235 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 SAMHD1Q9Y3Z3 626 aaKnown RBP21.56■■□□□ 1.04
LDB1-201ENST00000361198 MYO10Q9HD67 2058 aa21.56■■□□□ 1.04
LDB1-201ENST00000361198 A0A1W2PRB8 838 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 SUV39H1O43463 412 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 CEACAM5P06731 702 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 CXCR2P25025 360 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 MASP1P48740 699 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 ITGA1P56199 1179 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 MVKQ03426 396 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 MAD2L1BPQ15013 274 aaPredicted RBP21.55■■□□□ 1.04
LDB1-201ENST00000361198 TEAD4Q15561 434 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 SLC5A12Q1EHB4 618 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 TMEM196Q5HYL7 178 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 HORMAD1Q86X24 394 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 ADGRF3Q8IZF5 1079 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 PITX2Q99697 317 aa21.55■■□□□ 1.04
LDB1-201ENST00000361198 SLC17A9Q9BYT1 436 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms