RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 NPLQ9BXD5 320 aaPredicted RBP12.84□□□□□ -0.35
VPS29-201ENST00000360579 PRTFDC1Q9NRG1 225 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 C20orf96Q9NUD7 363 aaPredicted RBP12.84□□□□□ -0.35
VPS29-201ENST00000360579 FOXD3Q9UJU5 478 aaPredicted RBP12.84□□□□□ -0.35
VPS29-201ENST00000360579 FBXO5Q9UKT4 447 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 MRPS33Q9Y291 106 aaKnown RBP12.84□□□□□ -0.35
VPS29-201ENST00000360579 PCDHGB3Q9Y5G1 929 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 LIPGQ9Y5X9 500 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 A0A088AWK7 358 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 ZCWPW2A0A1B0GU75 182 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 FAM171A2A8MVW0 826 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 DVL2O14641 736 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 HAUS5O94927 633 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 SERPINA6P08185 405 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 F7P08709 466 aaPredicted RBP12.83□□□□□ -0.36
VPS29-201ENST00000360579 ZNF10P21506 573 aaPredicted RBP12.83□□□□□ -0.36
VPS29-201ENST00000360579 ADSLP30566 484 aaPredicted RBP12.83□□□□□ -0.36
VPS29-201ENST00000360579 SOX3P41225 446 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 STXBP1P61764 594 aaKnown RBP12.83□□□□□ -0.36
VPS29-201ENST00000360579 REEP5Q00765 189 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 SLC13A2Q13183 592 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 BMPR2Q13873 1038 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 KEAP1Q14145 624 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 DAZAP2Q15038 168 aaPredicted RBP12.83□□□□□ -0.36
VPS29-201ENST00000360579 ELAVL1Q15717 326 aaKnown RBP12.83□□□□□ -0.36
VPS29-201ENST00000360579 XKR6Q5GH73 641 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 FBXW10Q5XX13 1052 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 FAM47EQ6ZV65 393 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 CAND1Q86VP6 1230 aaKnown RBP12.83□□□□□ -0.36
VPS29-201ENST00000360579 GABPB2Q8TAK5 448 aaPredicted RBP12.83□□□□□ -0.36
VPS29-201ENST00000360579 DAZLQ92904 295 aaKnown RBP12.83□□□□□ -0.36
VPS29-201ENST00000360579 NEIL2Q969S2 332 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 OR4K3Q96R72 315 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 BAG1Q99933 345 aaPredicted RBP12.83□□□□□ -0.36
VPS29-201ENST00000360579 FAM167BQ9BTA0 163 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 EXO5Q9H790 373 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 PELI2Q9HAT8 420 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 XAB2Q9HCS7 855 aaKnown RBP12.83□□□□□ -0.36
VPS29-201ENST00000360579 DMRT3Q9NQL9 472 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 HOMER3Q9NSC5 361 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 SACM1LQ9NTJ5 587 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 DYRK1BQ9Y463 629 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 CLCA3PQ9Y6N3 262 aa12.83□□□□□ -0.36
VPS29-201ENST00000360579 HRNRQ86YZ3 2850 aaPredicted RBP12.83□□□□□ -0.36
VPS29-201ENST00000360579 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.82□□□□□ -0.36
VPS29-201ENST00000360579 A0A0G2JMM0 328 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 ATP6AP2A0A1C7CYW4 349 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 A0A1W2PPB8 328 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 A0A1W2PRS3 328 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 KIR3DP1A8MWS1 328 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 WWP2O00308 870 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 PRKNO60260 465 aaPredicted RBP12.82□□□□□ -0.36
VPS29-201ENST00000360579 ATP6AP2O75787 350 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 ATE1O95260 518 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 P04436 131 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 ENO2P09104 434 aaPredicted RBP12.82□□□□□ -0.36
VPS29-201ENST00000360579 INHBBP09529 407 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 ASCL1P50553 236 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 RBBP5Q15291 538 aaKnown RBP12.82□□□□□ -0.36
VPS29-201ENST00000360579 PAQR3Q6TCH7 311 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 OPN5Q6U736 354 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 C16orf47Q6ZP98 133 aaPredicted RBP12.82□□□□□ -0.36
VPS29-201ENST00000360579 ZNF595Q8IYB9 648 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 FBXW8Q8N3Y1 598 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 ANKRD53Q8N9V6 530 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 WFDC11Q8NEX6 87 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 OR5L2Q8NGL0 311 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 OR8K3Q8NH51 312 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 RNASE6Q93091 150 aaKnown RBP12.82□□□□□ -0.36
VPS29-201ENST00000360579 FBXL8Q96CD0 374 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 LINGO1Q96FE5 620 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 KLHL31Q9H511 634 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 ALKBH4Q9NXW9 302 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 MTRF1LQ9UGC7 380 aaKnown RBP12.82□□□□□ -0.36
VPS29-201ENST00000360579 CBLCQ9ULV8 474 aa12.82□□□□□ -0.36
VPS29-201ENST00000360579 TRGV5A0A0B4J1U4 118 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 G3V3Y1 287 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 GOSR1O95249 250 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 PPP2R1BP30154 601 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 HPDP32754 393 aaPredicted RBP12.81□□□□□ -0.36
VPS29-201ENST00000360579 KCNJ1P48048 391 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 TERF1P54274 439 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 RAB38P57729 211 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 IL2P60568 153 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 BTN3A2P78410 334 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 FOXO1Q12778 655 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 TBL3Q12788 808 aaKnown RBP12.81□□□□□ -0.36
VPS29-201ENST00000360579 SNTB1Q13884 538 aaKnown RBP12.81□□□□□ -0.36
VPS29-201ENST00000360579 RCN2Q14257 317 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 ZNF750Q32MQ0 723 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 FBXL19-AS1Q494R0 122 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 HSP90AA5PQ58FG0 334 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 TOR1AIP1Q5JTV8 583 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 CLEC9AQ6UXN8 241 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 MORN4Q8NDC4 146 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 MCUQ8NE86 351 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 TTLQ8NG68 377 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 OR14A16Q8NHC5 309 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 SLCO2A1Q92959 643 aa12.81□□□□□ -0.36
VPS29-201ENST00000360579 GAL3ST3Q96A11 431 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms