RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SLC24A5Q71RS6 500 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 TMPRSS11BQ86T26 416 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 PGBD3Q8N328 593 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 OR4K3Q96R72 315 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 TAPBPLQ9BX59 468 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 ARHGAP39Q9C0H5 1083 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 MARCH5Q9NX47 278 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 ZDHHC3Q9NYG2 299 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 C5AR2Q9P296 337 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 RUVBL1Q9Y265 456 aaKnown RBP9.69□□□□□ -0.86
PTPRA-203ENST00000356147 CMAHPQ9Y471 501 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 PCDHGB2Q9Y5G2 931 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 TRPM7Q96QT4 1865 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 PLXNA3P51805 1871 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 TLR4O00206 839 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 FFAR1O14842 300 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 OR10H3O60404 316 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 ICMTO60725 284 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 UGT2B17O75795 530 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 NCR1O76036 304 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 PTGER1P34995 402 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 LIM2P55344 173 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 SCN1BQ07699 218 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 EFR3AQ14156 821 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 INSL4Q14641 139 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 LARS2Q15031 903 aaKnown RBP9.69□□□□□ -0.86
PTPRA-203ENST00000356147 GCNT6Q5T4J0 391 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 B3GLCTQ6Y288 498 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 USP50Q70EL3 339 aaPredicted RBP9.69□□□□□ -0.86
PTPRA-203ENST00000356147 FLCNQ8NFG4 579 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 WDR48Q8TAF3 677 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 ENKURQ8TC29 256 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 PCNPQ8WW12 178 aaKnown RBP9.69□□□□□ -0.86
PTPRA-203ENST00000356147 SLC6A18Q96N87 628 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 SGIP1Q9BQI5 828 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 CDCA4Q9BXL8 241 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 RSPO3Q9BXY4 272 aaPredicted RBP9.69□□□□□ -0.86
PTPRA-203ENST00000356147 BRD9Q9H8M2 597 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 ASAH2Q9NR71 780 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 TMEM161AQ9NX61 479 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 TVP23BQ9NYZ1 205 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 UNC80Q8N2C7 3258 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 C12orf71A8MTZ7 269 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 PLA2G10O15496 165 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 CELF2O95319 508 aaKnown RBP9.69□□□□□ -0.86
PTPRA-203ENST00000356147 OR56A5P0C7T3 313 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 PTSQ03393 145 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 EIF4HQ15056 248 aaKnown RBP9.69□□□□□ -0.86
PTPRA-203ENST00000356147 P2RY14Q15391 338 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 MPEG1Q2M385 716 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 MLIPQ5VWP3 458 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 DEF8Q6ZN54 512 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 FAM9CQ8IZT9 166 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 ARL14EPQ8N8R7 260 aaPredicted RBP9.69□□□□□ -0.86
PTPRA-203ENST00000356147 FBXO22Q8NEZ5 403 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 OR5H6Q8NGV6 325 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 WDR20Q8TBZ3 569 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 C1GALT1C1Q96EU7 318 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 PIP5K1AQ99755 562 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 PCDH10Q9P2E7 1040 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 NLKQ9UBE8 527 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 FTSJ1Q9UET6 329 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 SNX7Q9UNH6 387 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 SH2B3Q9UQQ2 575 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 OR6C75A6NL08 312 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 TBKBP1A7MCY6 615 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 ARHGEF33A8MVX0 844 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SYN3O14994 580 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 TLX2O43763 284 aaPredicted RBP9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SEMA7AO75326 666 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SLC16A8O95907 504 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 IGHA2P01877 340 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 YES1P07947 543 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 PTNP21246 168 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 ALDH6A1Q02252 535 aaKnown RBP9.68□□□□□ -0.86
PTPRA-203ENST00000356147 ZNF91Q05481 1191 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 PUM1Q14671 1186 aaKnown RBP eCLIP9.68□□□□□ -0.861e-7■■□□□ 13.4
PTPRA-203ENST00000356147 YIF1BQ5BJH7 314 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 ATAT1Q5SQI0 421 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SAXO2Q658L1 398 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 TXNDC8Q6A555 127 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 BRAT1Q6PJG6 821 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 USP30Q70CQ3 517 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SZRD1Q7Z422 152 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 ELMOD2Q8IZ81 293 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SLC38A6Q8IZM9 456 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 OR7G3Q8NG95 312 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 FRMD6Q96NE9 622 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SLC22A4Q9H015 551 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 NDRG2Q9UN36 371 aaKnown RBP9.68□□□□□ -0.86
PTPRA-203ENST00000356147 GRIP1Q9Y3R0 1128 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SPIN1Q9Y657 262 aaPredicted RBP9.68□□□□□ -0.86
PTPRA-203ENST00000356147 A0A1B0GVC2 190 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 A6NIN4 97 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 ZAR1LA6NP61 321 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SH3BP5O60239 455 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 TNFRSF21O75509 655 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SCO1O75880 301 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 RECKO95980 971 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SCG5P05408 212 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms