RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 FGF18O76093 207 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 IGLV3-25P01717 112 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 KLK1P06870 262 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 CHRNB1P11230 501 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 DNASE1P24855 282 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 C21orf33P30042 268 aaPredicted RBP13.52□□□□□ -0.25
SREBF1-202ENST00000355815 SHMT2P34897 504 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 MNDAP41218 407 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 CBLBQ13191 982 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 SLBPQ14493 270 aaKnown RBP eCLIP13.52□□□□□ -0.25
SREBF1-202ENST00000355815 CRTC1Q6UUV9 634 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 TPT1P8Q9HAU6 139 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 PCDHB14Q9Y5E9 798 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 CORINQ9Y5Q5 1042 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 DOCK1Q14185 1865 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 LOC100509620A0A075B734 347 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 TTC34A8MYJ7 566 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 CENPBD1B2RD01 187 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 TLR4O00206 839 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 ICMTO60725 284 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 UPK1BO75841 260 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 NUDT14O95848 222 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 RPS17P08708 135 aaKnown RBP13.52□□□□□ -0.25
SREBF1-202ENST00000355815 BMP4P12644 408 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 SYN1P17600 705 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 XKP51811 444 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 RPS13P62277 151 aaKnown RBP13.52□□□□□ -0.25
SREBF1-202ENST00000355815 RACK1P63244 317 aaKnown RBP13.52□□□□□ -0.25
SREBF1-202ENST00000355815 POU4F3Q15319 338 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 ANXA8L1Q5VT79 327 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 TPGS2Q68CL5 300 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 SLAIN1Q8ND83 568 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 NETO1Q8TDF5 533 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 RIT1Q92963 219 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 ZCCHC2Q9C0B9 1178 aaKnown RBP13.52□□□□□ -0.25
SREBF1-202ENST00000355815 MRPL15Q9P015 296 aaKnown RBP13.52□□□□□ -0.25
SREBF1-202ENST00000355815 GPSM3Q9Y4H4 160 aa13.52□□□□□ -0.25
SREBF1-202ENST00000355815 ANKRD34BA5PLL1 514 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 WASH4PA8MWX3 477 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 PCCBP05166 539 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 STOMP27105 288 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 PSMD8P48556 350 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 LRRC37A5PQ49AS3 106 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 THOC6Q86W42 341 aaKnown RBP13.51□□□□□ -0.25
SREBF1-202ENST00000355815 FAM86B1Q8N7N1 296 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 BOLLQ8N9W6 283 aaKnown RBP13.51□□□□□ -0.25
SREBF1-202ENST00000355815 CXorf40AQ8TE69 158 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 BHLHE41Q9C0J9 482 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-202ENST00000355815 ABCG5Q9H222 651 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 SMURF1Q9HCE7 757 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 DEC1Q9P2X7 70 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 ZNF69Q9UC07 566 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 IKZF2Q9UKS7 526 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 CMAHPQ9Y471 501 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 ZNF831Q5JPB2 1677 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 RTCAO00442 366 aaKnown RBP13.51□□□□□ -0.25
SREBF1-202ENST00000355815 PPIBP23284 216 aaKnown RBP13.51□□□□□ -0.25
SREBF1-202ENST00000355815 ACRV1P26436 265 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 EMX1Q04741 257 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-202ENST00000355815 SLC3A1Q07837 685 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 SCRN3Q0VDG4 424 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 SGCGQ13326 291 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 NOXRED1Q6NXP6 359 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 NRARPQ7Z6K4 114 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 OR5J2Q8NH18 312 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 GPN1Q9HCN4 374 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-202ENST00000355815 ZNF334Q9HCZ1 680 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-202ENST00000355815 RANGRFQ9HD47 186 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-202ENST00000355815 CORO2BQ9UQ03 480 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 ATG2BQ96BY7 2078 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 GLOD5A6NK44 160 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 E2F3O00716 465 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 PCDH7O60245 1069 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 PRPS2P11908 318 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 HTR1BP28222 390 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 PTGER1P34995 402 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 C9orf64Q5T6V5 341 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 CD300LGQ6UXG3 332 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 PELI3Q8N2H9 469 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 BCL7CQ8WUZ0 217 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-202ENST00000355815 TDP1Q9NUW8 608 aa13.51□□□□□ -0.25
SREBF1-202ENST00000355815 CNOT11Q9UKZ1 510 aaKnown RBP13.51□□□□□ -0.25
SREBF1-202ENST00000355815 TCRBV3S1A0A5B6 114 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 DLGAP1O14490 977 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 DRD5P21918 477 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 RCAN2Q14206 197 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 FAM83FQ8NEG4 500 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-202ENST00000355815 RAB8BQ92930 207 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 NKD1Q969G9 470 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 RPL36Q9Y3U8 105 aaKnown RBP13.5□□□□□ -0.25
SREBF1-202ENST00000355815 SH3D21A4FU49 640 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 OR14I1A6ND48 311 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 ADAM23O75077 832 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 EEDO75530 441 aaKnown RBP13.5□□□□□ -0.25
SREBF1-202ENST00000355815 ZNF432O94892 652 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 EBLN1P0CF75 366 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 HSD17B1P14061 328 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 DGKGP49619 791 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 CDK5R2Q13319 367 aa13.5□□□□□ -0.25
SREBF1-202ENST00000355815 MED27Q6P2C8 311 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms