RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 SLC22A14Q9Y267 594 aa9□□□□□ -0.97
SMG6-202ENST00000354901 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 OR5K3A6NET4 321 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 WASHC1A8K0Z3 465 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 M0R082 166 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 SLC28A1O00337 649 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 HOXA2O43364 376 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 CSTF2P33240 577 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMG6-202ENST00000354901 PIK3CBP42338 1070 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 PPP3CCP48454 512 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 ARHGDIBP52566 201 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 BNC1Q01954 994 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 WSCD2Q2TBF2 565 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 POM121L1PQ3SYA9 428 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 SERPINA13PQ6UXR4 307 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 C17orf107Q6ZR85 190 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 ZNF621Q6ZSS3 439 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 PRSS42Q7Z5A4 293 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 VTCN1Q7Z7D3 282 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 VRK3Q8IV63 474 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 HS6ST3Q8IZP7 471 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 VWA5B2Q8N398 1253 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 LILRB2Q8N423 598 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 ZNF675Q8TD23 568 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 FOXJ1Q92949 421 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 REXO5Q96IC2 774 aaKnown RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 IFT22Q9H7X7 185 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 LIN7BQ9HAP6 207 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 DIMT1Q9UNQ2 313 aaKnown RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 A0A0B4J203 849 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 LOC102723532A0A0G2JNH3 316 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 RFXANKO14593 260 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 PTHP01270 115 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 IL6P05231 212 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 CD70P32970 193 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 SPAM1P38567 509 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 HAAOP46952 286 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 SRP54P61011 504 aaKnown RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 COX10Q12887 443 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 ELOAQ14241 798 aaKnown RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 AANATQ16613 207 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 C21orf62-AS1Q17RA5 79 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 FAM209BQ5JX69 171 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 GPRC6AQ5T6X5 926 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 TRIQKQ629K1 86 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 LRRC66Q68CR7 880 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 ZNF57Q68EA5 555 aaPredicted RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 RETSATQ6NUM9 610 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 FIP1L1Q6UN15 594 aaKnown RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMG6-202ENST00000354901 RASSF6Q6ZTQ3 369 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 ZDHHC21Q8IVQ6 265 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 NXPE1Q8N323 547 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 HJURPQ8NCD3 748 aaPredicted RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 C19orf18Q8NEA5 215 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 ZNF461Q8TAF7 563 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 ASZ1Q8WWH4 475 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 TTC9Q92623 222 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 TMEM203Q969S6 136 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 PDLIM5Q96HC4 596 aaKnown RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 MTERF1Q99551 399 aaKnown RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 C12orf57Q99622 126 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 ZNF334Q9HCZ1 680 aaPredicted RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 IFT46Q9NQC8 304 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 KRT84Q9NSB2 600 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 ABCG2Q9UNQ0 655 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 HRH3Q9Y5N1 445 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 RAB19A4D1S5 217 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 FABP12A6NFH5 140 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 LGALS8O00214 317 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 FABP7O15540 132 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 DNAJB5O75953 348 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 CCR7P32248 378 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 TIE1P35590 1138 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 KIR2DL3P43628 341 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 CSTF3Q12996 717 aaKnown RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 MAD2L1Q13257 205 aaPredicted RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 MAB21L1Q13394 359 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 CBX2Q14781 532 aaPredicted RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 MFSD13AQ14CX5 517 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 USP39Q53GS9 565 aaKnown RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 INO80DQ53TQ3 878 aaPredicted RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 DGKKQ5KSL6 1271 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 SLC8B1Q6J4K2 584 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 CEP68Q76N32 757 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 KRT73Q86Y46 540 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 GIMAP5Q96F15 307 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 SMAD5Q99717 465 aaKnown RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 PPA2Q9H2U2 334 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 CLMPQ9H6B4 373 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 ZDHHC6Q9H6R6 413 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 GORASP2Q9H8Y8 452 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 B3GNT2Q9NY97 397 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 STOML2Q9UJZ1 356 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 PPT2Q9UMR5 302 aa8.99□□□□□ -0.97
SMG6-202ENST00000354901 PCDHGA9Q9Y5G4 932 aaKnown RBP8.99□□□□□ -0.97
SMG6-202ENST00000354901 ATG13O75143 517 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 PPM1BO75688 479 aa8.98□□□□□ -0.97
SMG6-202ENST00000354901 GDI2P50395 445 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms