RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 CBLBQ13191 982 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 PPP1R7Q15435 360 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 ZNF750Q32MQ0 723 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 DEFB134Q4QY38 66 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 XKR6Q5GH73 641 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 ZNF549Q6P9A3 640 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 GK5Q6ZS86 529 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 KIF18BQ86Y91 864 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 B3GNT7Q8NFL0 401 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 ASB15Q8WXK1 588 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 SLC30A3Q99726 388 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 CCDC77Q9BR77 488 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 FAM167BQ9BTA0 163 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 RHBGQ9H310 441 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 NECTIN3Q9NQS3 549 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 FOXD3Q9UJU5 478 aaPredicted RBP14.69□□□□□ -0.06
DDX55-202ENST00000354291 SNX12Q9UMY4 172 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 MED16Q9Y2X0 877 aa14.69□□□□□ -0.06
DDX55-202ENST00000354291 TCRBV16S1A1N1A0A5B0 115 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 EIF3FO00303 357 aaPredicted RBP14.68□□□□□ -0.06
DDX55-202ENST00000354291 GALR3O60755 368 aaPredicted RBP14.68□□□□□ -0.06
DDX55-202ENST00000354291 HAUS5O94927 633 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 OR6B1O95007 311 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 TTC4O95801 387 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 SERPIND1P05546 499 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 SLC35G6P0C7Q6 338 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 PGAM1P18669 254 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 CNR1P21554 472 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 SKIV2L2P42285 1042 aaKnown RBP14.68□□□□□ -0.06
DDX55-202ENST00000354291 CUL1Q13616 776 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 HSP90AA5PQ58FG0 334 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 RNASEH2BQ5TBB1 312 aaKnown RBP14.68□□□□□ -0.06
DDX55-202ENST00000354291 LRRC8EQ6NSJ5 796 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 UGT3A1Q6NUS8 523 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 CYHR1Q6ZMK1 362 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 QSOX2Q6ZRP7 698 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 SEM1Q6ZVN7 128 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 PHC2Q8IXK0 858 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 LRRC56Q8IYG6 542 aaPredicted RBP14.68□□□□□ -0.06
DDX55-202ENST00000354291 AGGF1Q8N302 714 aaeCLIP14.68□□□□□ -0.06
DDX55-202ENST00000354291 ZNF740Q8NDX6 193 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 GIMAP7Q8NHV1 300 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 ZNF592Q92610 1267 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 GPR21Q99679 349 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 FAM173AQ9BQD7 235 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 NAT9Q9BTE0 207 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 IL1RL2Q9HB29 575 aa14.68□□□□□ -0.06
DDX55-202ENST00000354291 PNO1Q9NRX1 252 aaKnown RBP14.68□□□□□ -0.06
DDX55-202ENST00000354291 TRMT1Q9NXH9 659 aaKnown RBP14.68□□□□□ -0.06
DDX55-202ENST00000354291 TRGV5A0A0B4J1U4 118 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 PRKNO60260 465 aaPredicted RBP14.67□□□□□ -0.06
DDX55-202ENST00000354291 ZFAND5O76080 213 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 HRGP04196 525 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 FBXL19-AS1Q494R0 122 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 CATSPEREQ5SY80 951 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 HECTD2Q5U5R9 776 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 CAPN12Q6ZSI9 719 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 YTHDF3Q7Z739 585 aaKnown RBP14.67□□□□□ -0.06
DDX55-202ENST00000354291 GPALPP1Q8IXQ4 340 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 NAXEQ8NCW5 288 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 TNIP2Q8NFZ5 429 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 CD200R1Q8TD46 325 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 NCLNQ969V3 563 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 ALKBH8Q96BT7 664 aaKnown RBP14.67□□□□□ -0.06
DDX55-202ENST00000354291 AARSD1Q9BTE6 412 aaKnown RBP14.67□□□□□ -0.06
DDX55-202ENST00000354291 EPB41L4BQ9H329 900 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 PRDM9Q9NQV7 894 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 IARS2Q9NSE4 1012 aaKnown RBP14.67□□□□□ -0.06
DDX55-202ENST00000354291 ZFATQ9P243 1243 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 SPRR3Q9UBC9 169 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 ASIC3Q9UHC3 531 aa14.67□□□□□ -0.06
DDX55-202ENST00000354291 ZNF223Q9UK11 482 aaPredicted RBP14.67□□□□□ -0.06
DDX55-202ENST00000354291 A0A1W2PPR1 153 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 PSMD12O00232 456 aaPredicted RBP14.66□□□□□ -0.06
DDX55-202ENST00000354291 WWP2O00308 870 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 CRLF1O75462 422 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 F7P08709 466 aaPredicted RBP14.66□□□□□ -0.06
DDX55-202ENST00000354291 TCP1P17987 556 aaKnown RBP14.66□□□□□ -0.06
DDX55-202ENST00000354291 ALOX12P18054 663 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 GRK3P35626 688 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 SOX3P41225 446 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 DNASE1L1P49184 302 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 WNT3P56703 355 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 HMBOX1Q6NT76 420 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 FAM47EQ6ZV65 393 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 UBE2R2Q712K3 238 aaPredicted RBP14.66□□□□□ -0.06
DDX55-202ENST00000354291 SPNS2Q8IVW8 549 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 PALM2Q8IXS6 379 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 ULK2Q8IYT8 1036 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 AFAP1L2Q8N4X5 818 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 MFSD9Q8NBP5 474 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 C2CD4AQ8NCU7 369 aaPredicted RBP14.66□□□□□ -0.06
DDX55-202ENST00000354291 VMP1Q96GC9 406 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 GRPEL1Q9HAV7 217 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 CCDC177Q9NQR7 707 aaPredicted RBP14.66□□□□□ -0.06
DDX55-202ENST00000354291 TAS2R13Q9NYV9 303 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 TRMT6Q9UJA5 497 aaKnown RBP14.66□□□□□ -0.06
DDX55-202ENST00000354291 SH2B3Q9UQQ2 575 aa14.66□□□□□ -0.06
DDX55-202ENST00000354291 DNALI1O14645 258 aaPredicted RBP14.65□□□□□ -0.06
DDX55-202ENST00000354291 NDUFS4O43181 175 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms