RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 WRAP53Q9BUR4 548 aaKnown RBP11.59□□□□□ -0.55
DDX4-201ENST00000353507 NLNQ9BYT8 704 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 MIR1-1HGQ9H1L0 117 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 CNOT2Q9NZN8 540 aaKnown RBP11.59□□□□□ -0.55
DDX4-201ENST00000353507 CCRL2O00421 344 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 SH3BP5O60239 455 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 APOA1P02647 267 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 IL3P08700 152 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 NPPBP16860 134 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 CRISP1P54107 249 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 EEF1A2Q05639 463 aaKnown RBP11.59□□□□□ -0.55
DDX4-201ENST00000353507 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.59□□□□□ -0.55
DDX4-201ENST00000353507 NOGQ13253 232 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 MPEG1Q2M385 716 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 FAM71E1Q6IPT2 247 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 KLHL17Q6TDP4 642 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 TECPR1Q7Z6L1 1165 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 SLC30A8Q8IWU4 369 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 LAS2Q8IYD9 372 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 NLGN4XQ8N0W4 816 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 IRF7Q92985 503 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 MTERF3Q96E29 417 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 OR5M11Q96RB7 305 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 NMNAT1Q9HAN9 279 aaPredicted RBP11.59□□□□□ -0.55
DDX4-201ENST00000353507 C11orf16Q9NQ32 467 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 MKLN1Q9UL63 735 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 SLC6A14Q9UN76 642 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 PCDHGB6Q9Y5F9 930 aa11.59□□□□□ -0.55
DDX4-201ENST00000353507 CCL16O15467 120 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 KCNK2O95069 426 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 DNTTP04053 509 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 CHMP24386 653 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 CNR2P34972 360 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 LIMS1P48059 325 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 DGKEP52429 567 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 PCBP3P57721 371 aaKnown RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 ZNF805Q5CZA5 627 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 DESI1Q6ICB0 168 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 TRMT11Q7Z4G4 463 aaKnown RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 CLIP4Q8N3C7 705 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 METTL4Q8N3J2 472 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 EFHD2Q96C19 240 aaPredicted RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 CDCA4Q9BXL8 241 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 MTG2Q9H4K7 406 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 RC3H2Q9HBD1 1191 aaKnown RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 EXOSC4Q9NPD3 245 aaKnown RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 CCDC177Q9NQR7 707 aaPredicted RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 TMCC3Q9ULS5 477 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 ITM2BQ9Y287 266 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 CAB39Q9Y376 341 aaPredicted RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 TSPAN11A1L157 253 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 ZAR1LA6NP61 321 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 PDZK1P1A8MUH7 402 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 GASTP01350 101 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 CTSLP07711 333 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 MMP12P39900 470 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 CCDC92Q53HC0 331 aaPredicted RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 TOR1AIP1Q5JTV8 583 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 REEP3Q6NUK4 255 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 LIPIQ6XZB0 460 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 CYP4Z2PQ8N1L4 340 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 FBXO15Q8NCQ5 510 aaPredicted RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 FAM46DQ8NEK8 389 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 OR9A1PQ8NGU1 263 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 WDR34Q96EX3 536 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 ZCCHC2Q9C0B9 1178 aaKnown RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 ITM2CQ9NQX7 267 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 SPHK2Q9NRA0 654 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 FTSJ1Q9UET6 329 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 RBMX2Q9Y388 322 aaKnown RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 KIF26AQ9ULI4 1882 aaPredicted RBP11.58□□□□□ -0.56
DDX4-201ENST00000353507 KIAA1549LQ6ZVL6 1849 aa11.58□□□□□ -0.56
DDX4-201ENST00000353507 ARRDC5A6NEK1 342 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 FAM227AF5H4B4 570 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 LOC110117498-PIK3R3F6TDL0 507 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 SPNP16150 400 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 UQCRC2P22695 453 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 WEE1P30291 646 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 PIK3CBP42338 1070 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 HMGA2P52926 109 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 TP53BP2Q13625 1128 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 GRIN2CQ14957 1233 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 LY6G5CQ5SRR4 150 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 TMEM215Q68D42 235 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 PLAG1Q6DJT9 500 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 FRMPD2BQ6IN97 320 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 NXPE4Q6UWF7 544 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 UNC5DQ6UXZ4 953 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 CEACAM20Q6UY09 585 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 PIK3R3Q92569 461 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 UBE2E3Q969T4 207 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 ZNF689Q96CS4 500 aaPredicted RBP11.57□□□□□ -0.56
DDX4-201ENST00000353507 KCNS3Q9BQ31 491 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 SGPP1Q9BX95 441 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 SLC6A16Q9GZN6 736 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 SPNS1Q9H2V7 528 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 EHD3Q9NZN3 535 aa11.57□□□□□ -0.56
DDX4-201ENST00000353507 MN1Q10571 1320 aaPredicted RBP11.57□□□□□ -0.56
DDX4-201ENST00000353507 MTCL1Q9Y4B5 1905 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms