RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 MRI1Q9BV20 369 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 BEX1Q9HBH7 125 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 OR6C2Q9NZP2 312 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 OR10H1Q9Y4A9 318 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 CACNA1SQ13698 1873 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 LINC00862A6NCI5 91 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 FLRT2O43155 660 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SCN2BO60939 215 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 TSPAN12O95859 305 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SPATA31C1P0DKV0 1188 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 CD1EP15812 388 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 EXOSC2Q13868 293 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 ERFEQ4G0M1 354 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 PLAG1Q6DJT9 500 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SYNE4Q8N205 404 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 AQP11Q8NBQ7 271 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 OR5B12Q96R08 314 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 TSSK6Q9BXA6 273 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ZDHHC5Q9C0B5 715 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 TMPRSS5Q9H3S3 457 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GORASP2Q9H8Y8 452 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 NANSQ9NR45 359 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 RNF215Q9Y6U7 377 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SPTBN2O15020 2390 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 CLDN9O95484 217 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 F10P00742 488 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 NR2F1P10589 423 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 RPL10P27635 214 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 CDH5P33151 784 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 FAM171BQ6P995 826 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ALKAL2Q6UX46 152 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 PCSK9Q8NBP7 692 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 HJURPQ8NCD3 748 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 C7orf57Q8NEG2 295 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 COPS5Q92905 334 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 MTFMTQ96DP5 389 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 SIGLEC10Q96LC7 697 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 VRK1Q99986 396 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 PAPOLGQ9BWT3 736 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 FGFBP2Q9BYJ0 223 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 POLR1EQ9GZS1 481 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 TOLLIPQ9H0E2 274 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ASB7Q9H672 318 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 KCNJ16Q9NPI9 418 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 RNF146Q9NTX7 359 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GPR83Q9NYM4 423 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 FLRT1Q9NZU1 646 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 PCYT1BQ9Y5K3 369 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 SNX10Q9Y5X0 201 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 LMO7Q8WWI1 1683 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 TMEM72A0PK05 275 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GGT3PA6NGU5 568 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ACOT8O14734 319 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GATBO75879 557 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 SPI1P17947 270 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GGT2P36268 569 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 CPT1AP50416 773 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 DYRK1AQ13627 763 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 TCTE1Q5JU00 501 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 PDE12Q6L8Q7 609 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 SLC30A6Q6NXT4 461 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 RPTNQ6XPR3 784 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 XYLT1Q86Y38 959 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 IGDCC3Q8IVU1 814 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GLIS1Q8NBF1 620 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SLC7A13Q8TCU3 470 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ASB13Q8WXK3 278 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 KCTD12Q96CX2 325 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 SLC38A3Q99624 504 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 HDHD5Q9BXW7 423 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ARHGEF4Q9NR80 690 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 VSX1Q9NZR4 365 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 KLHL9Q9P2J3 617 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 UXTQ9UBK9 157 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 FBXL4Q9UKA2 621 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 CABIN1Q9Y6J0 2220 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 FGF1P05230 155 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 MAGEB1P43366 347 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 TAS2R39P59534 338 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 FAM189A2Q15884 450 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 GTF2IRD2BQ6EKJ0 949 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 SLC22A25Q6T423 547 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 GTF2IRD2Q86UP8 949 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 OR10H4Q8NGA5 316 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 LINGO1Q96FE5 620 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 CAMK1GQ96NX5 476 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 METTL17Q9H7H0 456 aaPredicted RBP4.85□□□□□ -1.63
SKP1-202ENST00000353411 KANSL3Q9P2N6 904 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 ACSL6Q9UKU0 697 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 TMEM88BA6NKF7 163 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 AIPO00170 330 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 RBBP9O75884 186 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 LRATO95237 230 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 TSPAN15O95858 294 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 IFNA21P01568 189 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 DARSP14868 501 aaKnown RBP4.85□□□□□ -1.63
SKP1-202ENST00000353411 EPORP19235 508 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 PTAFRP25105 342 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 PCP4P48539 62 aa4.85□□□□□ -1.63
SKP1-202ENST00000353411 DGKGP49619 791 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms