RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ASGR2P07307 311 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 VASPP50552 380 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 ZNF423Q2M1K9 1284 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 VMACQ2NL98 169 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 TNFAIP8L2Q6P589 184 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 EPHX4Q8IUS5 362 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 AURKBQ96GD4 344 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 WDR12Q9GZL7 423 aaKnown RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 SLITRK2Q9H156 845 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 LMAN1LQ9HAT1 526 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 ING3Q9NXR8 418 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 GIMAP2Q9UG22 337 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 IFT52Q9Y366 437 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 THEGLP0DJG4 465 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 POLR2CP19387 275 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 PRKACBP22694 351 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 CARTPTQ16568 116 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 ZSWIM7Q19AV6 140 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 HENMT1Q5T8I9 393 aaKnown RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 CEACAM20Q6UY09 585 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 FGD2Q7Z6J4 655 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 WDR36Q8NI36 951 aaKnown RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 ZFAND2BQ8WV99 257 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 MAPKAP1Q9BPZ7 522 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 DPH7Q9BTV6 452 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 ADAM29Q9UKF5 820 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 TRBC2A0A5B9 178 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 EMC8O43402 210 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 GJB3O75712 270 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 IL7RP16871 459 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 ALDH3A2P51648 485 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 SRP54P61011 504 aaKnown RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 RABL3Q5HYI8 236 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 TCTE1Q5JU00 501 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 CCDC28AQ8IWP9 274 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 RASGEF1AQ8N9B8 481 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 L3MBTL4Q8NA19 623 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 C1QTNF3Q9BXJ4 246 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 MAT2BQ9NZL9 334 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 BLACEA4D250 179 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 FAM221BA6H8Z2 402 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 H3BSA7 217 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 NME6O75414 186 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 SORBS2O94875 1100 aaKnown RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 CTSCP53634 463 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 PTGR1Q14914 329 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 NADK2Q4G0N4 442 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 ZNF57Q68EA5 555 aaPredicted RBP11.66□□□□□ -0.54
SMAD9-201ENST00000350148 ADIPOR2Q86V24 386 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 CCDC36Q8IYA8 594 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 AMER2Q8N7J2 671 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 OR7G3Q8NG95 312 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 TESCQ96BS2 214 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 CLIP3Q96DZ5 547 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 TRPM7Q96QT4 1865 aa11.66□□□□□ -0.54
SMAD9-201ENST00000350148 TRBV5-4A0A0C4DH59 114 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 E7EQ34 232 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 TP73O15350 636 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 DUX1O43812 170 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 PSIP1O75475 530 aaKnown RBP11.65□□□□□ -0.54
SMAD9-201ENST00000350148 IL3P08700 152 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 ACPPP15309 386 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 TBC1D25Q3MII6 688 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 KIAA0895LQ68EN5 471 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 FBXO15Q8NCQ5 510 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-201ENST00000350148 GPR151Q8TDV0 419 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 NACC2Q96BF6 587 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 MYNNQ9NPC7 610 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 CRNNQ9UBG3 495 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-201ENST00000350148 GPR45Q9Y5Y3 372 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 HS3ST3A1Q9Y663 406 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 FAM149AA5PLN7 773 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 H0YIV9 168 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 E2F3O00716 465 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 ANGPTL1O95841 491 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 FHP07954 510 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 MATN1P21941 496 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 RPL4P36578 427 aaKnown RBP11.65□□□□□ -0.54
SMAD9-201ENST00000350148 KIAA1024LP59773 190 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 PDSS2Q86YH6 399 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 SYNPOQ8N3V7 929 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 LSM14AQ8ND56 463 aaKnown RBP11.65□□□□□ -0.54
SMAD9-201ENST00000350148 OR10G2Q8NGC3 310 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 HLA-CQ95604 372 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 DPYSL5Q9BPU6 564 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 Q9N2J8 555 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 DMRT3Q9NQL9 472 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 PRODH2Q9UF12 536 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 OR1A2Q9Y585 309 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 HYKKA2RU49 373 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 HMX2A2RU54 273 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 OR6C74A6NCV1 312 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 SCAMP1O15126 338 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 CHST10O43529 356 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 HTR6P50406 440 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 MINDY4Q4G0A6 757 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 MZT2BQ6NZ67 158 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 PARP8Q8N3A8 854 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 ZNF563Q8TA94 476 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms