RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 BRD9Q9H8M2 597 aa17.06■□□□□ 0.32
APP-202ENST00000348990 ANKRA2Q9H9E1 313 aa17.06■□□□□ 0.32
APP-202ENST00000348990 CNOT2Q9NZN8 540 aaKnown RBP17.06■□□□□ 0.32
APP-202ENST00000348990 MBD1Q9UIS9 605 aaPredicted RBP17.06■□□□□ 0.32
APP-202ENST00000348990 GREB1Q4ZG55 1949 aa17.05■□□□□ 0.32
APP-202ENST00000348990 SH3D21A4FU49 640 aa17.05■□□□□ 0.32
APP-202ENST00000348990 ETHE1O95571 254 aa17.05■□□□□ 0.32
APP-202ENST00000348990 PTX3P26022 381 aaPredicted RBP17.05■□□□□ 0.32
APP-202ENST00000348990 MAP2K3P46734 347 aa17.05■□□□□ 0.32
APP-202ENST00000348990 GPR19Q15760 415 aa17.05■□□□□ 0.32
APP-202ENST00000348990 SAXO2Q658L1 398 aa17.05■□□□□ 0.32
APP-202ENST00000348990 CXorf57Q6NSI4 855 aaKnown RBP17.05■□□□□ 0.32
APP-202ENST00000348990 TNFAIP8L2Q6P589 184 aaPredicted RBP17.05■□□□□ 0.32
APP-202ENST00000348990 TRIM40Q6P9F5 258 aa17.05■□□□□ 0.32
APP-202ENST00000348990 RSPO2Q6UXX9 243 aaPredicted RBP17.05■□□□□ 0.32
APP-202ENST00000348990 SLC38A6Q8IZM9 456 aa17.05■□□□□ 0.32
APP-202ENST00000348990 Q8N402 240 aa17.05■□□□□ 0.32
APP-202ENST00000348990 MND1Q9BWT6 205 aa17.05■□□□□ 0.32
APP-202ENST00000348990 HDHD2Q9H0R4 259 aa17.05■□□□□ 0.32
APP-202ENST00000348990 POLR2J3Q9H1A7 115 aaKnown RBP17.05■□□□□ 0.32
APP-202ENST00000348990 CTPS2Q9NRF8 586 aa17.05■□□□□ 0.32
APP-202ENST00000348990 HCSTQ9UBK5 93 aa17.05■□□□□ 0.32
APP-202ENST00000348990 ZNF670-ZNF695F2Z2N8 137 aa17.05■□□□□ 0.32
APP-202ENST00000348990 ZNF780AO75290 641 aaPredicted RBP17.05■□□□□ 0.32
APP-202ENST00000348990 AKR1A1P14550 325 aa17.05■□□□□ 0.32
APP-202ENST00000348990 BNC1Q01954 994 aa17.05■□□□□ 0.32
APP-202ENST00000348990 C2orf80Q0P641 193 aa17.05■□□□□ 0.32
APP-202ENST00000348990 LYPLAL1Q5VWZ2 237 aa17.05■□□□□ 0.32
APP-202ENST00000348990 XKRXQ6PP77 449 aa17.05■□□□□ 0.32
APP-202ENST00000348990 LAPTM4BQ86VI4 370 aa17.05■□□□□ 0.32
APP-202ENST00000348990 THOC6Q86W42 341 aaKnown RBP17.05■□□□□ 0.32
APP-202ENST00000348990 REM2Q8IYK8 340 aaPredicted RBP17.05■□□□□ 0.32
APP-202ENST00000348990 LMNTD1Q8N9Z9 388 aa17.05■□□□□ 0.32
APP-202ENST00000348990 TM9SF2Q99805 663 aa17.05■□□□□ 0.32
APP-202ENST00000348990 SLC12A9Q9BXP2 914 aa17.05■□□□□ 0.32
APP-202ENST00000348990 MKRN2Q9H000 416 aaKnown RBP17.05■□□□□ 0.32
APP-202ENST00000348990 MCUBQ9NWR8 336 aa17.05■□□□□ 0.32
APP-202ENST00000348990 ALG5Q9Y673 324 aa17.05■□□□□ 0.32
APP-202ENST00000348990 MYO10Q9HD67 2058 aa17.05■□□□□ 0.32
APP-202ENST00000348990 TRBV4-1A0A0J9YWV2 114 aa17.05■□□□□ 0.32
APP-202ENST00000348990 PRMT3O60678 531 aa17.05■□□□□ 0.32
APP-202ENST00000348990 ARHGEF15O94989 841 aa17.05■□□□□ 0.32
APP-202ENST00000348990 C8GP07360 202 aa17.05■□□□□ 0.32
APP-202ENST00000348990 PBLDP30039 288 aaPredicted RBP17.05■□□□□ 0.32
APP-202ENST00000348990 ASMTP46597 345 aa17.05■□□□□ 0.32
APP-202ENST00000348990 XKP51811 444 aa17.05■□□□□ 0.32
APP-202ENST00000348990 RPS13P62277 151 aaKnown RBP17.05■□□□□ 0.32
APP-202ENST00000348990 TARDBPQ13148 414 aaKnown RBP eCLIP17.05■□□□□ 0.32
APP-202ENST00000348990 MZT2BQ6NZ67 158 aa17.05■□□□□ 0.32
APP-202ENST00000348990 L3MBTL4Q8NA19 623 aa17.05■□□□□ 0.32
APP-202ENST00000348990 NELL2Q99435 816 aa17.05■□□□□ 0.32
APP-202ENST00000348990 GON7Q9BXV9 100 aa17.05■□□□□ 0.32
APP-202ENST00000348990 ACOXLQ9NUZ1 547 aa17.05■□□□□ 0.32
APP-202ENST00000348990 ZDHHC3Q9NYG2 299 aa17.05■□□□□ 0.32
APP-202ENST00000348990 KCNE1BA0A087WTH5 132 aa17.04■□□□□ 0.32
APP-202ENST00000348990 PRAMEF25A6NGN4 478 aa17.04■□□□□ 0.32
APP-202ENST00000348990 LZTS3O60299 673 aaPredicted RBP17.04■□□□□ 0.32
APP-202ENST00000348990 PRKAR1AP10644 381 aa17.04■□□□□ 0.32
APP-202ENST00000348990 MYL12AP19105 171 aa17.04■□□□□ 0.32
APP-202ENST00000348990 ZNF284Q2VY69 593 aa17.04■□□□□ 0.32
APP-202ENST00000348990 GPR33Q49SQ1 333 aa17.04■□□□□ 0.32
APP-202ENST00000348990 CLLU1OSQ5K130 101 aa17.04■□□□□ 0.32
APP-202ENST00000348990 SLC35F1Q5T1Q4 408 aa17.04■□□□□ 0.32
APP-202ENST00000348990 TMPRSS11BQ86T26 416 aa17.04■□□□□ 0.32
APP-202ENST00000348990 PPCDCQ96CD2 204 aa17.04■□□□□ 0.32
APP-202ENST00000348990 RACGAP1Q9H0H5 632 aa17.04■□□□□ 0.32
APP-202ENST00000348990 TXNL4BQ9NX01 149 aaKnown RBP17.04■□□□□ 0.32
APP-202ENST00000348990 TRPM5Q9NZQ8 1165 aa17.04■□□□□ 0.32
APP-202ENST00000348990 TMPRSS11EQ9UL52 423 aa17.04■□□□□ 0.32
APP-202ENST00000348990 NDRG2Q9UN36 371 aaKnown RBP17.04■□□□□ 0.32
APP-202ENST00000348990 RPL36Q9Y3U8 105 aaKnown RBP17.04■□□□□ 0.32
APP-202ENST00000348990 PCM1Q15154 2024 aa17.04■□□□□ 0.32
APP-202ENST00000348990 NPIPB15A6NHN6 443 aaPredicted RBP17.04■□□□□ 0.32
APP-202ENST00000348990 TGFB1P01137 390 aa17.04■□□□□ 0.32
APP-202ENST00000348990 CD22P20273 847 aa17.04■□□□□ 0.32
APP-202ENST00000348990 ENDOUP21128 410 aaKnown RBP17.04■□□□□ 0.32
APP-202ENST00000348990 CRYBB2P43320 205 aa17.04■□□□□ 0.32
APP-202ENST00000348990 SMAD3P84022 425 aaKnown RBP17.04■□□□□ 0.32
APP-202ENST00000348990 RPS26P11Q5JNZ5 115 aaPredicted RBP17.04■□□□□ 0.32
APP-202ENST00000348990 FAM109AQ8N4B1 249 aa17.04■□□□□ 0.32
APP-202ENST00000348990 MAP6Q96JE9 813 aa17.04■□□□□ 0.32
APP-202ENST00000348990 KCTD7Q96MP8 289 aa17.04■□□□□ 0.32
APP-202ENST00000348990 WACQ9BTA9 647 aa17.04■□□□□ 0.32
APP-202ENST00000348990 HDHD5Q9BXW7 423 aa17.04■□□□□ 0.32
APP-202ENST00000348990 LOC102723532A0A0G2JNH3 316 aa17.03■□□□□ 0.32
APP-202ENST00000348990 A0A0X1KG70 313 aa17.03■□□□□ 0.32
APP-202ENST00000348990 ANKDD1BA6NHY2 528 aa17.03■□□□□ 0.32
APP-202ENST00000348990 ZNF197O14709 1029 aa17.03■□□□□ 0.32
APP-202ENST00000348990 HBQ1P09105 142 aa17.03■□□□□ 0.32
APP-202ENST00000348990 HNMTP50135 292 aa17.03■□□□□ 0.32
APP-202ENST00000348990 ZNF91Q05481 1191 aa17.03■□□□□ 0.32
APP-202ENST00000348990 PLD1Q13393 1074 aa17.03■□□□□ 0.32
APP-202ENST00000348990 ASAH1Q13510 395 aa17.03■□□□□ 0.32
APP-202ENST00000348990 SLC5A12Q1EHB4 618 aa17.03■□□□□ 0.32
APP-202ENST00000348990 SYTL3Q4VX76 610 aa17.03■□□□□ 0.32
APP-202ENST00000348990 LDLRAD1Q5T700 205 aa17.03■□□□□ 0.32
APP-202ENST00000348990 OR2G6Q5TZ20 316 aa17.03■□□□□ 0.32
APP-202ENST00000348990 RETSATQ6NUM9 610 aa17.03■□□□□ 0.32
APP-202ENST00000348990 APCDD1Q8J025 514 aa17.03■□□□□ 0.32
APP-202ENST00000348990 C7orf57Q8NEG2 295 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms