RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 MC1RQ01726 317 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 C2orf80Q0P641 193 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 EIF3IQ13347 325 aaKnown RBP25.6■■□□□ 1.69
SSBP4-202ENST00000348495 UGT8Q16880 541 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 NDUFAF5Q5TEU4 345 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 TMEM126BQ8IUX1 230 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 MMP21Q8N119 569 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 CA13Q8N1Q1 262 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 CTRCQ99895 268 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 REEP4Q9H6H4 257 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 ATP6V1HQ9UI12 483 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 PHF11Q9UIL8 331 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 TMEM184BQ9Y519 407 aaPredicted RBP25.6■■□□□ 1.69
SSBP4-202ENST00000348495 CNOT1A5YKK6 2376 aaKnown RBP25.59■■□□□ 1.69
SSBP4-202ENST00000348495 A0A1B0GX78 115 aa25.59■■□□□ 1.69
SSBP4-202ENST00000348495 A0A1W2PNU3 283 aaPredicted RBP25.59■■□□□ 1.69
SSBP4-202ENST00000348495 GUCY1B2O75343 617 aa25.59■■□□□ 1.69
SSBP4-202ENST00000348495 SCRG1O75711 98 aa25.59■■□□□ 1.69
SSBP4-202ENST00000348495 KCNK5O95279 499 aa25.59■■□□□ 1.69
SSBP4-202ENST00000348495 FURINP09958 794 aa25.59■■□□□ 1.69
SSBP4-202ENST00000348495 PRDX6P30041 224 aa25.59■■□□□ 1.69
SSBP4-202ENST00000348495 AVPR1BP47901 424 aa25.59■■□□□ 1.69
SSBP4-202ENST00000348495 HEPACAMQ14CZ8 416 aa25.59■■□□□ 1.69
SSBP4-202ENST00000348495 SHISA5Q8N114 240 aa25.59■■□□□ 1.69
SSBP4-202ENST00000348495 STARD8Q92502 1023 aa25.59■■□□□ 1.69
SSBP4-202ENST00000348495 ZBTB18Q99592 522 aa25.59■■□□□ 1.69
SSBP4-202ENST00000348495 ACTR5Q9H9F9 607 aaPredicted RBP25.59■■□□□ 1.69
SSBP4-202ENST00000348495 SLC39A1Q9NY26 324 aa25.59■■□□□ 1.69
SSBP4-202ENST00000348495 CCDC187A0A096LP49 1063 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 DRD2P14416 443 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 ITGAXP20702 1163 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 DDCP20711 480 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 HPCAL1P37235 193 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 PRMT9Q6P2P2 845 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 CAMKMTQ7Z624 323 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 TMPRSS12Q86WS5 348 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 SLC38A9Q8NBW4 561 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 RP9Q8TA86 221 aaKnown RBP25.58■■□□□ 1.69
SSBP4-202ENST00000348495 TSPEARQ8WU66 669 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 PMEPA1Q969W9 287 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 MTERF3Q96E29 417 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 ZNF764Q96H86 408 aaPredicted RBP25.58■■□□□ 1.69
SSBP4-202ENST00000348495 MS4A12Q9NXJ0 267 aa25.58■■□□□ 1.69
SSBP4-202ENST00000348495 GABRR3A8MPY1 467 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 CHST10O43529 356 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 AIFM1O95831 613 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 COX4I1P13073 169 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 ITIH1P19827 911 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 ALAS2P22557 587 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 ETV5P41161 510 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 MAPRE2Q15555 327 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 SPANXN4Q5MJ08 99 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 SNX32Q86XE0 403 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 METTL27Q8N6F8 245 aaPredicted RBP25.57■■□□□ 1.68
SSBP4-202ENST00000348495 MMABQ96EY8 250 aaPredicted RBP25.57■■□□□ 1.68
SSBP4-202ENST00000348495 FAIM2Q9BWQ8 316 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 CDC14AQ9UNH5 594 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 PCDHA9Q9Y5H5 950 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 PMS2P1A4D2B8 440 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 TBX19O60806 448 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 SNRPB2P08579 225 aaKnown RBP25.57■■□□□ 1.68
SSBP4-202ENST00000348495 T-ENOLP0DO92 83 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 PIM1P11309 404 aaPredicted RBP25.57■■□□□ 1.68
SSBP4-202ENST00000348495 CAPN3P20807 821 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 TNFRSF17Q02223 184 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 FAM174BQ3ZCQ3 159 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 C18orf63Q68DL7 685 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 EFCAB3Q8N7B9 438 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 POU5F2Q8N7G0 328 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 OR7A2PQ8NGA2 310 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 ADAMTS14Q8WXS8 1223 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 COQ8BQ96D53 544 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 CMTM5Q96DZ9 223 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 GBP5Q96PP8 586 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 NDOR1Q9UHB4 597 aa25.57■■□□□ 1.68
SSBP4-202ENST00000348495 LOC100653049A0A140TA62 436 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 NR5A2O00482 541 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 CYR61O00622 381 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 KRT34O76011 436 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 CBX6O95503 412 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 IL6P05231 212 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 HBQ1P09105 142 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 RPL3P39023 403 aaKnown RBP25.56■■□□□ 1.68
SSBP4-202ENST00000348495 KCNK10P57789 538 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 RAB15P59190 212 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 CYLC2Q14093 348 aaPredicted RBP25.56■■□□□ 1.68
SSBP4-202ENST00000348495 RSPO4Q2I0M5 234 aaPredicted RBP25.56■■□□□ 1.68
SSBP4-202ENST00000348495 DPY19L1Q2PZI1 675 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 R3HCC1LQ7Z5L2 792 aaKnown RBP25.56■■□□□ 1.68
SSBP4-202ENST00000348495 OR8J2Q8NGG1 315 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 UCN3Q969E3 161 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 SPDL1Q96EA4 605 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 CSF3RQ99062 836 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 SLC25A23Q9BV35 468 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 TXLNGQ9NUQ3 528 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 EHD3Q9NZN3 535 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 TAGLN3Q9UI15 199 aa25.56■■□□□ 1.68
SSBP4-202ENST00000348495 C1orf226A1L170 272 aa25.55■■□□□ 1.68
SSBP4-202ENST00000348495 DYTNA2CJ06 578 aa25.55■■□□□ 1.68
SSBP4-202ENST00000348495 PLD2O14939 933 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms