RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 GPR34Q9UPC5 381 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 ZFR2Q9UPR6 939 aaKnown RBP20.37■□□□□ 0.85
PTPN18-202ENST00000347849 METTL15A6NJ78 407 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 H0YIV9 168 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 VIPP01282 170 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 PRPS2P11908 318 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 NR4A2P43354 598 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 TUBA1BP68363 451 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 CAMK2GQ13555 558 aaPredicted RBP20.37■□□□□ 0.85
PTPN18-202ENST00000347849 ZNF181Q2M3W8 571 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 UBE2UQ5VVX9 321 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 FAM46CQ5VWP2 391 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 Q6ZPB1 254 aaPredicted RBP20.37■□□□□ 0.85
PTPN18-202ENST00000347849 TUBA1AQ71U36 451 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 ENTHD1Q8IYW4 607 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 OR9A1PQ8NGU1 263 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 CDC26Q8NHZ8 85 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 ITM2CQ9NQX7 267 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 BTBD3Q9Y2F9 522 aa20.37■□□□□ 0.85
PTPN18-202ENST00000347849 SERTM1A2A2V5 107 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 NPIPB8E9PQR5 432 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 YY2O15391 372 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 VEGFDO43915 354 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 GADD45AP24522 165 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 P3H2Q8IVL5 708 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 CLIP4Q8N3C7 705 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 CAPSLQ8WWF8 208 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 PROX1Q92786 737 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 C11orf24Q96F05 449 aaPredicted RBP20.36■□□□□ 0.85
PTPN18-202ENST00000347849 COPS4Q9BT78 406 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 ANKHQ9HCJ1 492 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 VPS4AQ9UN37 437 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 KCNE2Q9Y6J6 123 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 DENND4AQ7Z401 1863 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 C17orf113A0A1B0GUU1 675 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 M0R082 166 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 ASNA1O43681 348 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 HOXB9P17482 250 aaPredicted RBP20.36■□□□□ 0.85
PTPN18-202ENST00000347849 TCEA1P23193 301 aaKnown RBP20.36■□□□□ 0.85
PTPN18-202ENST00000347849 S100A1P23297 94 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 RAE1P78406 368 aaKnown RBP20.36■□□□□ 0.85
PTPN18-202ENST00000347849 ADAM15Q13444 863 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 UGT8Q16880 541 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 LRIT3Q3SXY7 679 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 ADAMTSL4Q6UY14 1074 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 ZNF740Q8NDX6 193 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 GPR156Q8NFN8 814 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 FCRL1Q96LA6 429 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 HHIPQ96QV1 700 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 HOXD1Q9GZZ0 328 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 REEP1Q9H902 201 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 THUMPD1Q9NXG2 353 aaKnown RBP20.36■□□□□ 0.85
PTPN18-202ENST00000347849 KLHL3Q9UH77 587 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 RNF6Q9Y252 685 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 ASF1AQ9Y294 204 aa20.36■□□□□ 0.85
PTPN18-202ENST00000347849 TRIOO75962 3097 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 LATO43561 262 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 MRPS14O60783 128 aaKnown RBP20.35■□□□□ 0.85
PTPN18-202ENST00000347849 KDELR2P33947 212 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 HNF4AP41235 474 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 RPS13P62277 151 aaKnown RBP20.35■□□□□ 0.85
PTPN18-202ENST00000347849 CSTF3Q12996 717 aaKnown RBP20.35■□□□□ 0.85
PTPN18-202ENST00000347849 DESI1Q6ICB0 168 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 GPR153Q6NV75 609 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 C1orf52Q8N6N3 182 aaKnown RBP20.35■□□□□ 0.85
PTPN18-202ENST00000347849 FBXO15Q8NCQ5 510 aaPredicted RBP20.35■□□□□ 0.85
PTPN18-202ENST00000347849 HSH2DQ96JZ2 352 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 SIGLEC11Q96RL6 698 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 SAGE2PA6NJ88 616 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 TAF4O00268 1085 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 CLIC1O00299 241 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 KCNK5O95279 499 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 EIF2S1P05198 315 aaKnown RBP20.35■□□□□ 0.85
PTPN18-202ENST00000347849 ENGP17813 658 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 UGT2B10P36537 528 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 RAB30Q15771 203 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 VMACQ2NL98 169 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 TPRG1LQ5T0D9 272 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 CCDC80Q76M96 950 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 SYT12Q8IV01 421 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 TPD52L3Q96J77 140 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 ZNF514Q96K75 400 aaPredicted RBP20.35■□□□□ 0.85
PTPN18-202ENST00000347849 DPH2Q9BQC3 489 aaPredicted RBP20.35■□□□□ 0.85
PTPN18-202ENST00000347849 SGPP1Q9BX95 441 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 RNF167Q9H6Y7 350 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 PRM3Q9NNZ6 103 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 IFT52Q9Y366 437 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 CAB39Q9Y376 341 aaPredicted RBP20.35■□□□□ 0.85
PTPN18-202ENST00000347849 TESMINQ9Y4I5 508 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 UGT2A1Q9Y4X1 527 aa20.35■□□□□ 0.85
PTPN18-202ENST00000347849 LOC100506127A0A0U1RQW1 187 aa20.34■□□□□ 0.85
PTPN18-202ENST00000347849 TIGD6Q17RP2 521 aa20.34■□□□□ 0.85
PTPN18-202ENST00000347849 SOWAHCQ53LP3 525 aaPredicted RBP20.34■□□□□ 0.85
PTPN18-202ENST00000347849 ZNF621Q6ZSS3 439 aa20.34■□□□□ 0.85
PTPN18-202ENST00000347849 UTS2BQ765I0 119 aa20.34■□□□□ 0.85
PTPN18-202ENST00000347849 SERPINA11Q86U17 422 aa20.34■□□□□ 0.85
PTPN18-202ENST00000347849 AMZ2Q86W34 360 aa20.34■□□□□ 0.85
PTPN18-202ENST00000347849 TESCQ96BS2 214 aa20.34■□□□□ 0.85
PTPN18-202ENST00000347849 KCNC2Q96PR1 638 aa20.34■□□□□ 0.85
PTPN18-202ENST00000347849 ACAT2Q9BWD1 397 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms