RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PSD3Q9NYI0 1048 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 AHSPQ9NZD4 102 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 PHF11Q9UIL8 331 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 PCTPQ9UKL6 214 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 STK38LQ9Y2H1 464 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 SAGE2PA6NJ88 616 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 C4orf51C9J302 202 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 GOLGA8RI6L899 631 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 FOXE1O00358 373 aaPredicted RBP14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 CDK2AP1O14519 115 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 CTNSO60931 367 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 DNAJB6O75190 326 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 GLRA3O75311 464 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 ATP5F1P24539 256 aaPredicted RBP14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 GCAP28676 217 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 PPP2R1BP30154 601 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 BUD31P41223 144 aaPredicted RBP14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 CD97P48960 835 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 EFNA3P52797 238 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 IFFO1Q0D2I5 559 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 SERTAD2Q14140 314 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 ACER2Q5QJU3 275 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 ADNP2Q6IQ32 1131 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 CYP20A1Q6UW02 462 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 CNTRLQ7Z7A1 2325 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 TMEM132CQ8N3T6 1108 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 Q8NA96 180 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 PSMF1Q92530 271 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 DEFB126Q9BYW3 111 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 AICDAQ9GZX7 198 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 SEMA4BQ9NPR2 832 aaPredicted RBP14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 SNX6Q9UNH7 406 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 RNF11Q9Y3C5 154 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 CLCA3PQ9Y6N3 262 aa14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 HELZ2Q9BYK8 2649 aaKnown RBP14.79□□□□□ -0.04
TSPAN4-201ENST00000346501 IGKV3D-11A0A0A0MRZ8 115 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 ARHGAP10A1A4S6 786 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 CCDC151A5D8V7 595 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 OR5H15A6NDH6 313 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 SMIM23A6NLE4 172 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 A8MT66 165 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 A8MUA0 341 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 SAP18O00422 153 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 FCHO1O14526 889 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 CDH16O75309 829 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 SUPT7LO94864 414 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 MLYCDO95822 493 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 CELA2AP08217 269 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 PYGBP11216 843 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 COX7A2P14406 83 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 TNNI3P19429 210 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 CLCN2P51788 898 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 NAA20P61599 178 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 RPS13P62277 151 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 HERVK_113P63132 956 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 SLAMF1Q13291 335 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 BIKQ13323 160 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 CUL3Q13618 768 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 TERF2Q15554 542 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 INAQ16352 499 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 FRG2Q64ET8 278 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 FAM180AQ6UWF9 173 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 PAGE2Q7Z2X7 111 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 CUZD1Q86UP6 607 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 TDRPQ86YL5 185 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 LGI4Q8N135 537 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 MYRIPQ8NFW9 859 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 DAZLQ92904 295 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 SNRNP40Q96DI7 357 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 FRG2BQ96QU4 278 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 UTP23Q9BRU9 249 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 ERVK-6Q9BXR3 956 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 ADAP2Q9NPF8 381 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 NECTIN3Q9NQS3 549 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 LYARQ9NX58 379 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 PLA2G3Q9NZ20 509 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 TMEM216Q9P0N5 145 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 FBXW2Q9UKT8 454 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 GRID1Q9ULK0 1009 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 PCDHGA10Q9Y5H3 936 aa14.78□□□□□ -0.04
TSPAN4-201ENST00000346501 RTCAO00442 366 aaKnown RBP14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 OR7A17O14581 309 aa14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 MYO1DO94832 1006 aa14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 SCELO95171 688 aa14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 WDPCPO95876 746 aa14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 RPS17P08708 135 aaKnown RBP14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 SLCO1A2P46721 670 aa14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 TNFSF10P50591 281 aa14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 OC90Q02509 493 aaPredicted RBP14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 RASA2Q15283 850 aa14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 ELAVL1Q15717 326 aaKnown RBP14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 GGTA1PQ4G0N0 100 aa14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 H3F3CQ6NXT2 135 aa14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 RPUSD3Q6P087 351 aaKnown RBP14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 GPR180Q86V85 440 aa14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 RPS19BP1Q86WX3 136 aaKnown RBP14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 NUDT13Q86X67 352 aa14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 SCUBE1Q8IWY4 988 aa14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 ZCCHC7Q8N3Z6 543 aaKnown RBP14.77□□□□□ -0.05
TSPAN4-201ENST00000346501 CCDC63Q8NA47 563 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms