RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 RAB23Q9ULC3 237 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 SNX11Q9Y5W9 270 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 LRRTM2O43300 516 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 TNFRSF21O75509 655 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 XCR1P46094 333 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 ASAH1Q13510 395 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 LRRC73Q5JTD7 316 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 ABI3BPQ7Z7G0 1075 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 YIPF7Q8N8F6 280 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 FAM46DQ8NEK8 389 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 TRIM63Q969Q1 353 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 MED8Q96G25 268 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 RIPOR3Q96MK2 946 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 CASD1Q96PB1 797 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 PKP4Q99569 1192 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 MAPKAP1Q9BPZ7 522 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 SPATA6Q9NWH7 488 aaPredicted RBP17.01■□□□□ 0.31
VHL-202ENST00000345392 ZDHHC3Q9NYG2 299 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 STUB1Q9UNE7 303 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 CRYZL1O95825 349 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 C6orf47O95873 294 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 C8GP07360 202 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 CCNYL3P0C7X3 344 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 TRAPPC2P0DI81 140 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 TRAPPC2BP0DI82 140 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 PPIBP23284 216 aaKnown RBP17.01■□□□□ 0.31
VHL-202ENST00000345392 PTX3P26022 381 aaPredicted RBP17.01■□□□□ 0.31
VHL-202ENST00000345392 CSTF2P33240 577 aaKnown RBP eCLIP17.01■□□□□ 0.31
VHL-202ENST00000345392 SNRPD2P62316 118 aaKnown RBP17.01■□□□□ 0.31
VHL-202ENST00000345392 RHAGQ02094 409 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.01■□□□□ 0.31
VHL-202ENST00000345392 EFR3AQ14156 821 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 TCTN1Q2MV58 587 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 PYDC2Q56P42 97 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 CDKL4Q5MAI5 379 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 SLC35F1Q5T1Q4 408 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 GCNT6Q5T4J0 391 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 RDH10Q8IZV5 341 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 TAGAPQ8N103 731 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 SIX5Q8N196 739 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 CHTF18Q8WVB6 975 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 SNAPC3Q92966 411 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 CIDECQ96AQ7 238 aaPredicted RBP17.01■□□□□ 0.31
VHL-202ENST00000345392 C11orf24Q96F05 449 aaPredicted RBP17.01■□□□□ 0.31
VHL-202ENST00000345392 WDFY2Q96P53 400 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 RETREG1Q9H6L5 497 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 CWH43Q9H720 699 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 SGK2Q9HBY8 427 aa17.01■□□□□ 0.31
VHL-202ENST00000345392 EXO1Q9UQ84 846 aaKnown RBP17.01■□□□□ 0.31
VHL-202ENST00000345392 PLA2G10O15496 165 aa17■□□□□ 0.31
VHL-202ENST00000345392 GPC1P35052 558 aa17■□□□□ 0.31
VHL-202ENST00000345392 LIMS1P48059 325 aa17■□□□□ 0.31
VHL-202ENST00000345392 AP1S1P61966 158 aa17■□□□□ 0.31
VHL-202ENST00000345392 MC1RQ01726 317 aa17■□□□□ 0.31
VHL-202ENST00000345392 SAXO2Q658L1 398 aa17■□□□□ 0.31
VHL-202ENST00000345392 C22orf42Q6IC83 251 aa17■□□□□ 0.31
VHL-202ENST00000345392 TMIGD1Q6UXZ0 262 aa17■□□□□ 0.31
VHL-202ENST00000345392 LAS2Q8IYD9 372 aa17■□□□□ 0.31
VHL-202ENST00000345392 OR9Q1Q8NGQ5 310 aa17■□□□□ 0.31
VHL-202ENST00000345392 ASIC4Q96FT7 647 aa17■□□□□ 0.31
VHL-202ENST00000345392 SLC25A19Q9HC21 320 aa17■□□□□ 0.31
VHL-202ENST00000345392 THSD1Q9NS62 852 aa17■□□□□ 0.31
VHL-202ENST00000345392 TMEM39AQ9NV64 488 aa17■□□□□ 0.31
VHL-202ENST00000345392 ZNF282Q9UDV7 671 aaPredicted RBP17■□□□□ 0.31
VHL-202ENST00000345392 SEC14L4Q9UDX3 406 aa17■□□□□ 0.31
VHL-202ENST00000345392 CD84Q9UIB8 345 aa17■□□□□ 0.31
VHL-202ENST00000345392 SSR3Q9UNL2 185 aa17■□□□□ 0.31
VHL-202ENST00000345392 PCDHB7Q9Y5E2 793 aa17■□□□□ 0.31
VHL-202ENST00000345392 SLC35F4A4IF30 521 aa17■□□□□ 0.31
VHL-202ENST00000345392 TLR4O00206 839 aa17■□□□□ 0.31
VHL-202ENST00000345392 AKR7A2O43488 359 aa17■□□□□ 0.31
VHL-202ENST00000345392 ICMTO60725 284 aa17■□□□□ 0.31
VHL-202ENST00000345392 TSPAN19P0C672 248 aa17■□□□□ 0.31
VHL-202ENST00000345392 DUSP7Q16829 419 aa17■□□□□ 0.31
VHL-202ENST00000345392 ANXA8L1Q5VT79 327 aa17■□□□□ 0.31
VHL-202ENST00000345392 CRTC1Q6UUV9 634 aa17■□□□□ 0.31
VHL-202ENST00000345392 SUN5Q8TC36 379 aa17■□□□□ 0.31
VHL-202ENST00000345392 TMEM161AQ9NX61 479 aa17■□□□□ 0.31
VHL-202ENST00000345392 TRBV4-1A0A0J9YWV2 114 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 TRBC2A0A5B9 178 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 FADS2P1A8MWK0 482 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 OR56A5P0C7T3 313 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 CDK6Q00534 326 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 FAPQ12884 760 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.99■□□□□ 0.311e-7■□□□□ 9.2
VHL-202ENST00000345392 SIGIRRQ6IA17 410 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 FAM180BQ6P0A1 224 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 THOC6Q86W42 341 aaKnown RBP16.99■□□□□ 0.31
VHL-202ENST00000345392 HOMEZQ8IX15 550 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 PHC2Q8IXK0 858 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 CELF5Q8N6W0 485 aaKnown RBP16.99■□□□□ 0.31
VHL-202ENST00000345392 NLGN4YQ8NFZ3 816 aaPredicted RBP16.99■□□□□ 0.31
VHL-202ENST00000345392 HCAR2Q8TDS4 363 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 GEMIN6Q8WXD5 167 aaKnown RBP16.99■□□□□ 0.31
VHL-202ENST00000345392 KLHL6Q8WZ60 621 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 TMEM80Q96HE8 168 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 SAMD11Q96NU1 681 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 TTLL2Q9BWV7 592 aa16.99■□□□□ 0.31
VHL-202ENST00000345392 YARS2Q9Y2Z4 477 aaKnown RBP16.99■□□□□ 0.31
VHL-202ENST00000345392 PCM1Q15154 2024 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms