RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 G3BP2Q9UN86 482 aaKnown RBP13.06□□□□□ -0.32
TPM4-202ENST00000344824 CDC14AQ9UNH5 594 aa13.06□□□□□ -0.32
TPM4-202ENST00000344824 PCDHGA11Q9Y5H2 935 aa13.06□□□□□ -0.32
TPM4-202ENST00000344824 BAHCC1Q9P281 2608 aa13.06□□□□□ -0.32
TPM4-202ENST00000344824 B8ZZF3 427 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 PYCARD-AS1I3L0S3 204 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 MASP2O00187 686 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 SDHDO14521 159 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 NDUFS4O43181 175 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 ALOX12BO75342 701 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 CXCR2P25025 360 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 AVPR1BP47901 424 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 MAT1AQ00266 395 aaKnown RBP13.05□□□□□ -0.32
TPM4-202ENST00000344824 HMGCS1Q01581 520 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 PCDH1Q08174 1060 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 MFSD4BQ5TF39 518 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 TMIGD1Q6UXZ0 262 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 APLFQ8IW19 511 aaPredicted RBP13.05□□□□□ -0.32
TPM4-202ENST00000344824 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.05□□□□□ -0.32
TPM4-202ENST00000344824 CAMKVQ8NCB2 501 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 OR7G3Q8NG95 312 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 STT3BQ8TCJ2 826 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 SLC13A3Q8WWT9 602 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 REPS1Q96D71 796 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 SEC16BQ96JE7 1060 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 OR52B2Q96RD2 323 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 SPSB2Q99619 263 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 SIKE1Q9BRV8 207 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 TRIM4Q9C037 500 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 MEAF6Q9HAF1 191 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 NXT1Q9UKK6 140 aaKnown RBP13.05□□□□□ -0.32
TPM4-202ENST00000344824 H0YIV9 168 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 K7EM74 188 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 LCMT2O60294 686 aaKnown RBP13.05□□□□□ -0.32
TPM4-202ENST00000344824 ALBP02768 609 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 KLC1Q07866 573 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 E2F2Q14209 437 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 NR6A1Q15406 480 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 TERF2Q15554 542 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 GALNTL6Q49A17 601 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 VWA2Q5GFL6 755 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 GARNL3Q5VVW2 1013 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 FAAH2Q6GMR7 532 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 ASB18Q6ZVZ8 466 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 ACAD11Q709F0 780 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 PRSS41Q7RTY9 318 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 PPP1R32Q7Z5V6 425 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 TMEM102Q8N9M5 508 aaPredicted RBP13.05□□□□□ -0.32
TPM4-202ENST00000344824 MFSD9Q8NBP5 474 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 CLEC1AQ8NC01 280 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 KCT2Q8NC54 265 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 CCDC197Q8NCU1 140 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 OR4K1Q8NGD4 311 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 OR9A4Q8NGU2 314 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 OR2T11Q8NH01 316 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 HUS1BQ8NHY5 278 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 WDR20Q8TBZ3 569 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 UBE2E3Q969T4 207 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 TUBGCP3Q96CW5 907 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 IP6K3Q96PC2 410 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 WDR54Q9H977 334 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 P4HTMQ9NXG6 502 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 HCN3Q9P1Z3 774 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 ARL2BPQ9Y2Y0 163 aa13.05□□□□□ -0.32
TPM4-202ENST00000344824 HELZ2Q9BYK8 2649 aaKnown RBP13.04□□□□□ -0.32
TPM4-202ENST00000344824 TRBC2A0A5B9 178 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 ZNF860A6NHJ4 632 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 ANKDD1BA6NHY2 528 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 MAGEB17A8MXT2 336 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 E9PBE3 544 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 SLC28A1O00337 649 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 FOXS1O43638 330 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 KLHL41O60662 606 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 PEX11AO75192 247 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 ZGLP1P0C6A0 271 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 PGDP52209 483 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 RPS13P62277 151 aaKnown RBP13.04□□□□□ -0.32
TPM4-202ENST00000344824 SNRPNP63162 240 aaKnown RBP13.04□□□□□ -0.32
TPM4-202ENST00000344824 PHEXP78562 749 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 GABPB1Q06547 395 aaPredicted RBP13.04□□□□□ -0.32
TPM4-202ENST00000344824 DSG2Q14126 1118 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 SPDYAQ5MJ70 313 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 MED25Q71SY5 747 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 LAS2Q8IYD9 372 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 ANKRD53Q8N9V6 530 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 THAP11Q96EK4 314 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 MVB12AQ96EY5 273 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 MARK4Q96L34 752 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 FER1L6-AS2Q96M78 137 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 RBCK1Q9BYM8 510 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 ACPTQ9BZG2 426 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 SLC26A1Q9H2B4 701 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 AKTIPQ9H8T0 292 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 ANKHQ9HCJ1 492 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 TCF7L2Q9NQB0 619 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 PFDN4Q9NQP4 134 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 ENAMQ9NRM1 1142 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 RIC8BQ9NVN3 520 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 SLC12A4Q9UP95 1085 aa13.04□□□□□ -0.32
TPM4-202ENST00000344824 RGS14O43566 566 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms