RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 MAP2K6P52564 334 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ART1P52961 327 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 PTTG1IPP53801 180 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CDH12P55289 794 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 STARD6P59095 220 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 RNF141Q8WVD5 230 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 GULP1Q9UBP9 304 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 M0R2Z0 102 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 SMIM18P0DKX4 95 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF10P21506 573 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 BCAMP50895 628 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 LCN6P62502 163 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 SIM1P81133 766 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF547Q8IVP9 402 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 GLB1L3Q8NCI6 653 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 UBE2E3Q969T4 207 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TFB2MQ9H5Q4 396 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 KIF21AQ7Z4S6 1674 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 AGR2O95994 175 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CPN1P15169 458 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 PCGF2P35227 344 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CEACAM6P40199 344 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF674Q2M3X9 581 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ACOT6Q3I5F7 207 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 MGAT5BQ3V5L5 792 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ARMC12Q5T9G4 340 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 HECTD2Q5U5R9 776 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 MTFR2Q6P444 385 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 OR56B4Q8NH76 319 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ATOH1Q92858 354 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 LRRC58Q96CX6 371 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TARS2Q9BW92 718 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 IDI2Q9BXS1 227 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 NXF3Q9H4D5 531 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 KCMF1Q9P0J7 381 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 NCDNQ9UBB6 729 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CC2D2AQ9P2K1 1620 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF207O43670 478 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 MFSD11O43934 449 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF780AO75290 641 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 PRF1P14222 555 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CEBPBP17676 345 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ACVR2AP27037 513 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 PRCPP42785 496 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 FRRS1Q6ZNA5 592 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 SAMD7Q7Z3H4 446 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 BEST3Q8N1M1 668 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 PHYHIPQ92561 330 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 LGALS12Q96DT0 336 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 FAM84BQ96KN1 310 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 SLC6A7Q99884 636 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TMPRSS13Q9BYE2 586 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 A0A1W2PQ67 120 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 MGAT4DA6NG13 374 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TCP10L2B9ZVM9 353 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CIAO1O76071 339 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 RAF1P04049 648 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TACSTD2P09758 323 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TNFSF10P50591 281 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TCL1AP56279 114 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 PMVKQ15126 192 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 RSU1Q15404 277 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 LRRC73Q5JTD7 316 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 RBPMSQ93062 196 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 LMLNQ96KR4 655 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 MFSD14AQ96MC6 490 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 MIXL1Q9H2W2 232 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 RNF121Q9H920 327 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 GNG13Q9P2W3 67 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ABT1Q9ULW3 272 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 SLC45A1Q9Y2W3 748 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 WIF1Q9Y5W5 379 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ERVK-7P63135 1459 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CUL7Q14999 1698 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 CACNA1IQ9P0X4 2223 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 A0A1W2PPL8 197 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 SUPT3HB4E1H0 165 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 NPC1O15118 1278 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 MT-ND2P03891 347 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 STSP08842 583 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ACO1P21399 889 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TM4SF4P48230 202 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF41P51814 821 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 HERVK_113P62684 666 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 SLC25A3Q00325 362 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 PM20D1Q6GTS8 502 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 DPY19L2P1Q6NXN4 242 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 RBMS3Q6XE24 437 aaKnown RBP3.64□□□□□ -1.83
SYNE2-202ENST00000344113 HTR3DQ70Z44 454 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 RNF130Q86XS8 419 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 TGIF2LXQ8IUE1 241 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 BLIDQ8IZY5 108 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 FAM20AQ96MK3 541 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 GPR63Q9BZJ6 419 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 FBRSQ9HAH7 460 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 FAM206AQ9NX38 181 aa3.64□□□□□ -1.83
SYNE2-202ENST00000344113 UBFD1O14562 309 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TCAPO15273 167 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ADH1AP07327 375 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 BMP7P18075 431 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms