RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ANKRD53Q8N9V6 530 aa15.11■□□□□ 0.01
NECTIN1-202ENST00000340882 ARMC2Q8NEN0 867 aa15.11■□□□□ 0.01
NECTIN1-202ENST00000340882 Q96MF0 132 aa15.11■□□□□ 0.01
NECTIN1-202ENST00000340882 SLC6A15Q9H2J7 730 aa15.11■□□□□ 0.01
NECTIN1-202ENST00000340882 KLHL42Q9P2K6 505 aa15.11■□□□□ 0.01
NECTIN1-202ENST00000340882 AMFRQ9UKV5 643 aa15.11■□□□□ 0.01
NECTIN1-202ENST00000340882 ATG4BQ9Y4P1 393 aa15.11■□□□□ 0.01
NECTIN1-202ENST00000340882 TCRBV7S3A2A0A539 114 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 FAM47E-STBD1D6RA91 191 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 CLDN4O14493 209 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 PFDN6O15212 129 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 HCN1O60741 890 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 FTCDO95954 541 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 SCTRP47872 440 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 TIAL1Q01085 375 aaKnown RBP eCLIP15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 RGS1Q08116 209 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 RUNX2Q13950 521 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 PHKG1Q16816 387 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 KIAA0930Q6ICG6 404 aaPredicted RBP15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 ADGRD1Q6QNK2 874 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 PEX26Q7Z412 305 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 KCNJ9Q92806 393 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 EPB41L4BQ9H329 900 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 EIF2B3Q9NR50 452 aaKnown RBP15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 SACM1LQ9NTJ5 587 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 INTS10Q9NVR2 710 aaKnown RBP15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 PAK5Q9P286 719 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 ZFP69BQ9UJL9 534 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 MMACHCQ9Y4U1 282 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 HEATR5AQ86XA9 2040 aa15.1■□□□□ 0.01
NECTIN1-202ENST00000340882 SONP18583 2426 aaKnown RBP15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 A0A0G2JN53 185 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 TRIM64A6NGJ6 449 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 TRIM64BA6NI03 449 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 AVILO75366 819 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 SKP1P63208 163 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 ZNF470Q6ECI4 717 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 STRA8Q7Z7C7 330 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 CLNKQ7Z7G1 428 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 CCDC170Q8IYT3 715 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 UBL4BQ8N7F7 174 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 EEF1AKMT1Q8WVE0 214 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 SNF8Q96H20 258 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 ZNF703Q9H7S9 590 aaPredicted RBP15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 PRTFDC1Q9NRG1 225 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 SAMD15Q9P1V8 674 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 MTRF1LQ9UGC7 380 aaKnown RBP15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 TRPS1Q9UHF7 1281 aa15.09■□□□□ 0.01
NECTIN1-202ENST00000340882 MED12Q93074 2177 aa15.08■□□□□ 0.01
NECTIN1-202ENST00000340882 CTAGE9A4FU28 777 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 BTNL10A8MVZ5 291 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 ARHGEF9O43307 516 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 EPPINO95925 133 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 TRPC1P48995 793 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 BASP1P80723 227 aaKnown RBP15.08■□□□□ 0
NECTIN1-202ENST00000340882 ACSF3Q4G176 576 aaPredicted RBP15.08■□□□□ 0
NECTIN1-202ENST00000340882 TOR1AIP1Q5JTV8 583 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 NIPAL1Q6NVV3 410 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 P3H2Q8IVL5 708 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 FBXW8Q8N3Y1 598 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 CCDC89Q8N998 374 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 GOLM1Q8NBJ4 401 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 SIMC1Q8NDZ2 872 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 ZNF592Q92610 1267 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 NEIL2Q969S2 332 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 CALR3Q96L12 384 aaKnown RBP15.08■□□□□ 0
NECTIN1-202ENST00000340882 WDR83Q9BRX9 315 aaKnown RBP15.08■□□□□ 0
NECTIN1-202ENST00000340882 YIPF4Q9BSR8 244 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 CLK4Q9HAZ1 481 aaKnown RBP15.08■□□□□ 0
NECTIN1-202ENST00000340882 PARVBQ9HBI1 364 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 PROK2Q9HC23 129 aa15.08■□□□□ 0
NECTIN1-202ENST00000340882 ZNF629Q9UEG4 869 aaPredicted RBP15.08■□□□□ 0
NECTIN1-202ENST00000340882 FOXD3Q9UJU5 478 aaPredicted RBP15.08■□□□□ 0
NECTIN1-202ENST00000340882 EPN1Q9Y6I3 576 aaPredicted RBP15.08■□□□□ 0
NECTIN1-202ENST00000340882 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.08■□□□□ 0
NECTIN1-202ENST00000340882 DSCAMO60469 2012 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 LRRC3CA6NJW4 275 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 P04436 131 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 CCND1P24385 295 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 CYLC1P35663 651 aaPredicted RBP15.07■□□□□ 0
NECTIN1-202ENST00000340882 AHRP35869 848 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 BTN3A2P78410 334 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 PPP2R2BQ00005 443 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 DHX9Q08211 1270 aaKnown RBP15.07■□□□□ 0
NECTIN1-202ENST00000340882 BMPR2Q13873 1038 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 HSDL2Q6YN16 418 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 OR56A3Q8NH54 315 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 NEIL3Q8TAT5 605 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 PTPMT1Q8WUK0 201 aaPredicted RBP15.07■□□□□ 0
NECTIN1-202ENST00000340882 LRRC46Q96FV0 321 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 TSNARE1Q96NA8 513 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 HAUS8Q9BT25 410 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 SH2D2AQ9NP31 389 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 ADAP2Q9NPF8 381 aa15.07■□□□□ 0
NECTIN1-202ENST00000340882 MIF4GDA9UHW6 222 aaKnown RBP15.06■□□□□ 0
NECTIN1-202ENST00000340882 NRDCO43847 1150 aa15.06■□□□□ 0
NECTIN1-202ENST00000340882 HAUS5O94927 633 aa15.06■□□□□ 0
NECTIN1-202ENST00000340882 TIMP3P35625 211 aa15.06■□□□□ 0
NECTIN1-202ENST00000340882 SLC1A2P43004 574 aa15.06■□□□□ 0
NECTIN1-202ENST00000340882 TERF1P54274 439 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms