RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TSFMP43897 325 aaKnown RBP14.34□□□□□ -0.11
UBE3B-201ENST00000340074 ARFIP1P53367 373 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 PKNOX1P55347 436 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 NAA20P61599 178 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 Q0VFX4 171 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 PCOLCEQ15113 449 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 QSOX2Q6ZRP7 698 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 ANKRD37Q7Z713 158 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 PARP9Q8IXQ6 854 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 AMER2Q8N7J2 671 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 FAM47BQ8NA70 645 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 TMEM52Q8NDY8 209 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 METTL6Q8TCB7 284 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 PTCHD1Q96NR3 888 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 KCNA7Q96RP8 456 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 CSF3RQ99062 836 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 HBEGFQ99075 208 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 MAPKAP1Q9BPZ7 522 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 MECRQ9BV79 373 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 NUDT9Q9BW91 350 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 ZNF717Q9BY31 904 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-201ENST00000340074 LYRM4Q9HD34 91 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 MID1IP1Q9NPA3 183 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 GPR83Q9NYM4 423 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 KCMF1Q9P0J7 381 aa14.34□□□□□ -0.11
UBE3B-201ENST00000340074 C19orf25Q9UFG5 118 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-201ENST00000340074 PCDHGA9Q9Y5G4 932 aaKnown RBP14.34□□□□□ -0.11
UBE3B-201ENST00000340074 MANBAO00462 879 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 CYR61O00622 381 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 TRIM13O60858 407 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 SEC24DO94855 1032 aaPredicted RBP14.33□□□□□ -0.11
UBE3B-201ENST00000340074 PDGFAP04085 211 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 ITGA3P26006 1051 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 HMOX2P30519 316 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 BSGP35613 385 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 HNRNPFP52597 415 aaKnown RBP14.33□□□□□ -0.11
UBE3B-201ENST00000340074 SOX8P57073 446 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 SLAMF1Q13291 335 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 CASP8Q14790 479 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 LACTB2Q53H82 288 aaPredicted RBP14.33□□□□□ -0.11
UBE3B-201ENST00000340074 TCTN3Q6NUS6 607 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 ADAMTS18Q8TE60 1221 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 PGM2Q96G03 612 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 GATA5Q9BWX5 397 aaPredicted RBP14.33□□□□□ -0.11
UBE3B-201ENST00000340074 SLC29A3Q9BZD2 475 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 BRF2Q9HAW0 419 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 MLXIPLQ9NP71 852 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 PRDM9Q9NQV7 894 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 FBXW2Q9UKT8 454 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 TIMM22Q9Y584 194 aa14.33□□□□□ -0.11
UBE3B-201ENST00000340074 EEDO75530 441 aaKnown RBP14.32□□□□□ -0.12
UBE3B-201ENST00000340074 C1QL1O75973 258 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 SEMA3DO95025 777 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 KRT6AP02538 564 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 KRT6BP04259 564 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 ENO1P06733 434 aaKnown RBP14.32□□□□□ -0.12
UBE3B-201ENST00000340074 MYZAPP0CAP1 466 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 KRT6CP48668 564 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 PGDP52209 483 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 FOXA1P55317 472 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 RCN2Q14257 317 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 MYBPC3Q14896 1274 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 SFT2D3Q587I9 215 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 ZCCHC7Q8N3Z6 543 aaKnown RBP14.32□□□□□ -0.12
UBE3B-201ENST00000340074 THOC3Q96J01 351 aaKnown RBP14.32□□□□□ -0.12
UBE3B-201ENST00000340074 WDR77Q9BQA1 342 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-201ENST00000340074 MRPL1Q9BYD6 325 aaKnown RBP14.32□□□□□ -0.12
UBE3B-201ENST00000340074 SHCBP1LQ9BZQ2 653 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 DDX31Q9H8H2 851 aaKnown RBP14.32□□□□□ -0.12
UBE3B-201ENST00000340074 SSU72Q9NP77 194 aaKnown RBP14.32□□□□□ -0.12
UBE3B-201ENST00000340074 NECTIN3Q9NQS3 549 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 PRTFDC1Q9NRG1 225 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 RIC8BQ9NVN3 520 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 G3BP2Q9UN86 482 aaKnown RBP14.32□□□□□ -0.12
UBE3B-201ENST00000340074 SLC12A4Q9UP95 1085 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 MRPS33Q9Y291 106 aaKnown RBP14.32□□□□□ -0.12
UBE3B-201ENST00000340074 CFAP46Q8IYW2 2715 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 IGKV3D-11A0A0A0MRZ8 115 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 A0A0A6YYD5 115 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 CLDN4O14493 209 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 ULK1O75385 1050 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 GBAP04062 536 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 CELA2AP08217 269 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 ETV4P43268 484 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 HTR6P50406 440 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 OR4D2P58180 307 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 ACTN3Q08043 901 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-201ENST00000340074 ASPHQ12797 758 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 NFATC3Q12968 1075 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 SLC13A2Q13183 592 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 CYP20A1Q6UW02 462 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 ASB18Q6ZVZ8 466 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 NUDT13Q86X67 352 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 ZNF595Q8IYB9 648 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 ZNF843Q8N446 348 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 CNDP1Q96KN2 507 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 IMMP1LQ96LU5 166 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 SMAD5Q99717 465 aaKnown RBP14.32□□□□□ -0.12
UBE3B-201ENST00000340074 TUBB6Q9BUF5 446 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 TNFRSF12AQ9NP84 129 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms