RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 LRRC61Q9BV99 259 aa15.45■□□□□ 0.06
HPS1-202ENST00000338546 TRIM4Q9C037 500 aa15.45■□□□□ 0.06
HPS1-202ENST00000338546 EPS8L2Q9H6S3 715 aa15.45■□□□□ 0.06
HPS1-202ENST00000338546 PILRAQ9UKJ1 303 aa15.45■□□□□ 0.06
HPS1-202ENST00000338546 FAF1Q9UNN5 650 aaPredicted RBP15.45■□□□□ 0.06
HPS1-202ENST00000338546 ASB4Q9Y574 426 aa15.45■□□□□ 0.06
HPS1-202ENST00000338546 SNRNP200O75643 2136 aaKnown RBP15.44■□□□□ 0.06
HPS1-202ENST00000338546 A0A0J9YY10 115 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 RNF103-CHMP3A0A140T963 221 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 GSAPA4D1B5 854 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 FAM149AA5PLN7 773 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 ACOX3O15254 700 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 MAP3K13O43283 966 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 POLR2CP19387 275 aaPredicted RBP15.44■□□□□ 0.06
HPS1-202ENST00000338546 EFNA1P20827 205 aaPredicted RBP15.44■□□□□ 0.06
HPS1-202ENST00000338546 CHI3L1P36222 383 aaPredicted RBP15.44■□□□□ 0.06
HPS1-202ENST00000338546 RXRGP48443 463 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 SLAMF1Q13291 335 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 PDK3Q15120 406 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 TCEA2Q15560 299 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 ZNF630Q2M218 657 aaPredicted RBP15.44■□□□□ 0.06
HPS1-202ENST00000338546 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.44■□□□□ 0.06
HPS1-202ENST00000338546 GCNT6Q5T4J0 391 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 NDUFAF5Q5TEU4 345 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 KLHL35Q6PF15 583 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 EIF3MQ7L2H7 374 aaKnown RBP15.44■□□□□ 0.06
HPS1-202ENST00000338546 OOSP2Q86WS3 158 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 SVOPLQ8N434 492 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 CBR4Q8N4T8 237 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 FAM46DQ8NEK8 389 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 ZFP28Q8NHY6 868 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 BAHD1Q8TBE0 780 aaPredicted RBP15.44■□□□□ 0.06
HPS1-202ENST00000338546 NEURL3Q96EH8 262 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 ABCG4Q9H172 646 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 C1GALT1Q9NS00 363 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 HRASLS2Q9NWW9 162 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 SCOCQ9UIL1 159 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 OAZ3Q9UMX2 235 aa15.44■□□□□ 0.06
HPS1-202ENST00000338546 MDC1Q14676 2089 aaKnown RBP15.43■□□□□ 0.06
HPS1-202ENST00000338546 C7orf72A4D263 438 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 OR5K3A6NET4 321 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 SAC3D1A6NKF1 404 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 SOCS2O14508 198 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 TXNDC9O14530 226 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 WNT1P04628 370 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 SMIM10L1P0DMW3 83 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 MAGP20916 626 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 ZNF10P21506 573 aaPredicted RBP15.43■□□□□ 0.06
HPS1-202ENST00000338546 FASLGP48023 281 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 CXCL12P48061 93 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 ALDH9A1P49189 494 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 RPL6Q02878 288 aaKnown RBP15.43■□□□□ 0.06
HPS1-202ENST00000338546 HHEXQ03014 270 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 NRF1Q16656 503 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 ZNF542PQ5EBM4 170 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.43■□□□□ 0.06
HPS1-202ENST00000338546 FCRL6Q6DN72 434 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 CCDC80Q76M96 950 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 EPHX4Q8IUS5 362 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 DEFB123Q8N688 67 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 ZNF655Q8N720 491 aaPredicted RBP15.43■□□□□ 0.06
HPS1-202ENST00000338546 SMIM10Q96HG1 83 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 OSBPL10Q9BXB5 764 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 NTN4Q9HB63 628 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 SLC35C2Q9NQQ7 365 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 GPATCH2Q9NW75 528 aa15.43■□□□□ 0.06
HPS1-202ENST00000338546 TEX10Q9NXF1 929 aaPredicted RBP15.43■□□□□ 0.06
HPS1-202ENST00000338546 THUMPD1Q9NXG2 353 aaKnown RBP15.43■□□□□ 0.06
HPS1-202ENST00000338546 AXIN1O15169 862 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 ZSCAN9O15535 394 aaPredicted RBP15.42■□□□□ 0.06
HPS1-202ENST00000338546 DPM1O60762 260 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 HPRP00739 348 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 NTRK1P04629 796 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 LYNP07948 512 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 CELA2BP08218 269 aaPredicted RBP15.42■□□□□ 0.06
HPS1-202ENST00000338546 HOXB3P14651 431 aaPredicted RBP15.42■□□□□ 0.06
HPS1-202ENST00000338546 CRATP43155 626 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 TXNL4AP83876 142 aaKnown RBP15.42■□□□□ 0.06
HPS1-202ENST00000338546 SUZ12Q15022 739 aaKnown RBP15.42■□□□□ 0.06
HPS1-202ENST00000338546 NKG7Q16617 165 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 NHSL2Q5HYW2 709 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.42■□□□□ 0.06
HPS1-202ENST00000338546 SAXO2Q658L1 398 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 ARMC6Q6NXE6 501 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 RNF44Q7L0R7 432 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 PIWIL3Q7Z3Z3 882 aaKnown RBP15.42■□□□□ 0.06
HPS1-202ENST00000338546 APLFQ8IW19 511 aaPredicted RBP15.42■□□□□ 0.06
HPS1-202ENST00000338546 FAM86B1Q8N7N1 296 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 AMER3Q8N944 861 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 OR10G6Q8NH81 332 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 C1orf216Q8TAB5 229 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 PNPT1Q8TCS8 783 aaKnown RBP15.42■□□□□ 0.06
HPS1-202ENST00000338546 PATE1Q8WXA2 126 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 DNASE2BQ8WZ79 361 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 N4BP2L2Q92802 583 aaPredicted RBP15.42■□□□□ 0.06
HPS1-202ENST00000338546 RDH12Q96NR8 316 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 ZFYVE21Q9BQ24 234 aa15.42■□□□□ 0.06
HPS1-202ENST00000338546 DPH2Q9BQC3 489 aaPredicted RBP15.42■□□□□ 0.06
HPS1-202ENST00000338546 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.42■□□□□ 0.06
HPS1-202ENST00000338546 ASPSCR1Q9BZE9 553 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms