RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 TBRG1Q3YBR2 411 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 CNKSR3Q6P9H4 555 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 CCBE1Q6UXH8 406 aaPredicted RBP13.23□□□□□ -0.29
RTN4-202ENST00000337526 ZNF782Q6ZMW2 699 aaPredicted RBP13.23□□□□□ -0.29
RTN4-202ENST00000337526 NEIL3Q8TAT5 605 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 NR4A3Q92570 626 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 ZNF639Q9UID6 485 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 CARD8Q9Y2G2 431 aa13.23□□□□□ -0.29
RTN4-202ENST00000337526 C5orf51A6NDU8 294 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 KDM4BO94953 1096 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 PFKMP08237 780 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 OR12D1P0DN82 309 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 PTNP21246 168 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 ATP5A1P25705 553 aaKnown RBP13.22□□□□□ -0.29
RTN4-202ENST00000337526 STOMP27105 288 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 BMXP51813 675 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 GRSF1Q12849 480 aaKnown RBP eCLIP13.22□□□□□ -0.29
RTN4-202ENST00000337526 ARFRP1Q13795 201 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 CAMK1Q14012 370 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 UGT8Q16880 541 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 DTWD1Q8N5C7 304 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 YIPF7Q8N8F6 280 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 RNF38Q9H0F5 515 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 C12orf4Q9NQ89 552 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 EMCNQ9ULC0 261 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 PHRF1Q9P1Y6 1649 aaKnown RBP13.22□□□□□ -0.29
RTN4-202ENST00000337526 KDM3BQ7LBC6 1761 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 KIAA0513O60268 411 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 DCKP27707 260 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 CCKBRP32239 447 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 NRIP1P48552 1158 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 UGT2A3Q6UWM9 527 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 GRASPQ7Z6J2 395 aaPredicted RBP13.22□□□□□ -0.29
RTN4-202ENST00000337526 LRRTM3Q86VH5 581 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 IQCF2Q8IXL9 164 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 ZNF527Q8NB42 609 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 OR2L3Q8NG85 312 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 ZNF431Q8TF32 576 aaPredicted RBP13.22□□□□□ -0.29
RTN4-202ENST00000337526 PCDHGB6Q9Y5F9 930 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 HSPE1-MOB4S4R3N1 261 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 FAAHO00519 579 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 ZNF821O75541 412 aaPredicted RBP13.22□□□□□ -0.29
RTN4-202ENST00000337526 CD9P21926 228 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 GDI1P31150 447 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 GABARAPL2P60520 117 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 NCS1P62166 190 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 ZNF805Q5CZA5 627 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 TTYH2Q9BSA4 534 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 BEX2Q9BXY8 128 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 BEX1Q9HBH7 125 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 TAS2R10Q9NYW0 307 aa13.22□□□□□ -0.29
RTN4-202ENST00000337526 A8MUA0 341 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 MLLT10P55197 1068 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 LHFPL3Q86UP9 236 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 FRS2Q8WU20 508 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 ADAMTS5Q9UNA0 930 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 PCDHGA12O60330 932 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 OAZ2O95190 189 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 TAS2R43P59537 309 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 RASGEF1BQ0VAM2 473 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 GTDC1Q4AE62 458 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 PRAMEF17Q5VTA0 474 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 NCCRP1Q6ZVX7 275 aaPredicted RBP13.21□□□□□ -0.29
RTN4-202ENST00000337526 ARMCX6Q7L4S7 300 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 CCDC115Q96NT0 180 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 DGAT2Q96PD7 388 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 MTMR10Q9NXD2 777 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 ZDHHC7Q9NXF8 308 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 EXTL2Q9UBQ6 330 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 BLOC1S5-TXNDC5H3BN57 136 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 MITFO75030 526 aaPredicted RBP13.21□□□□□ -0.29
RTN4-202ENST00000337526 COQ9O75208 318 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 EDN1P05305 212 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 FOXA1P55317 472 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 RPL6Q02878 288 aaKnown RBP13.21□□□□□ -0.29
RTN4-202ENST00000337526 ZNF181Q2M3W8 571 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 C18orf21Q32NC0 220 aaPredicted RBP13.21□□□□□ -0.29
RTN4-202ENST00000337526 UAP1L1Q3KQV9 507 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 ZNF648Q5T619 568 aaPredicted RBP13.21□□□□□ -0.29
RTN4-202ENST00000337526 CES4AQ5XG92 561 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 PAQR7Q86WK9 346 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 CLECL1Q8IZS7 167 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 SAMD12Q8N8I0 201 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 ZNF615Q8N8J6 731 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 OR2AJ1Q8NGZ0 328 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 SECISBP2Q96T21 854 aaKnown RBP13.21□□□□□ -0.29
RTN4-202ENST00000337526 ZNF69Q9UC07 566 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 GNG8Q9UK08 70 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 TMEM5Q9Y2B1 443 aa13.21□□□□□ -0.29
RTN4-202ENST00000337526 FXYD6-FXYD2A0A087WZ82 144 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 C2orf78A6NCI8 922 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 PAK4O96013 591 aaPredicted RBP13.21□□□□□ -0.3
RTN4-202ENST00000337526 ETFAP13804 333 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 RHCEP18577 417 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 DCTP40126 519 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 APLP1P51693 650 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 HYAL2Q12891 473 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 LETMD1Q6P1Q0 360 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 GNPDA2Q8TDQ7 276 aa13.21□□□□□ -0.3
RTN4-202ENST00000337526 DPYSL5Q9BPU6 564 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms