RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 P2RY13Q9BPV8 354 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 NWD1Q149M9 1564 aa9.47□□□□□ -0.89
COL4A6-201ENST00000334504 OR6C75A6NL08 312 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 FGF3P11487 239 aaPredicted RBP9.46□□□□□ -0.89
COL4A6-201ENST00000334504 DRD5P21918 477 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 MYF6P23409 242 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 HNRNPDQ14103 355 aaKnown RBP9.46□□□□□ -0.89
COL4A6-201ENST00000334504 LRP8Q14114 963 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 GRIN2CQ14957 1233 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 PUS10Q3MIT2 529 aaKnown RBP9.46□□□□□ -0.89
COL4A6-201ENST00000334504 DCST2Q5T1A1 773 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 NPAS3Q8IXF0 933 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 ZFP41Q8N8Y5 198 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 OR8K5Q8NH50 307 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 TERB2Q8NHR7 220 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 C3orf49Q96BT1 292 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 FCRL5Q96RD9 977 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 SRMSQ9H3Y6 488 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 TLE6Q9H808 572 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 C19orf12Q9NSK7 152 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 FAM120CQ9NX05 1096 aaKnown RBP9.46□□□□□ -0.89
COL4A6-201ENST00000334504 GMEB2Q9UKD1 530 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 AP1M2Q9Y6Q5 423 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 HYKKA2RU49 373 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 LYRM1O43325 122 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 HLA-DQB2P05538 268 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 ZBTB48P10074 688 aaPredicted RBP9.46□□□□□ -0.89
COL4A6-201ENST00000334504 C7P10643 843 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 CBLP22681 906 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 SP3Q02447 781 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 EMX2Q04743 252 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 ZSWIM9Q86XI8 627 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 FAM109AQ8N4B1 249 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 SLC29A3Q9BZD2 475 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 GFOD1Q9NXC2 390 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 KCNS2Q9ULS6 477 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 SLC22A14Q9Y267 594 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 RNF11Q9Y3C5 154 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 GRXCR1A8MXD5 290 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 STATHP02808 62 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 CTHP32929 405 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 ACVR1BP36896 505 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 IRF5Q13568 498 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 MOGSQ13724 837 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 ABRAXAS2Q15018 415 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 NCBP2-AS2Q69YL0 99 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 TMPRSS12Q86WS5 348 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 KLBQ86Z14 1044 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 C1orf127Q8N9H9 656 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 OR2T35Q8NGX2 323 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 OR6N2Q8NGY6 317 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 BORCS8Q96FH0 119 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 POTEKPQ9BYX7 375 aa9.46□□□□□ -0.89
COL4A6-201ENST00000334504 ZC3H13Q5T200 1668 aaKnown RBP9.46□□□□□ -0.9
COL4A6-201ENST00000334504 LCHNA4D1U4 455 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 F5H5P2 479 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 AIPO00170 330 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 KHNYNO15037 678 aaKnown RBP9.46□□□□□ -0.9
COL4A6-201ENST00000334504 AGPAT2O15120 278 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 PRKYO43930 277 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 TGM6O95932 706 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 AMY2BP19961 511 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 FRKP42685 505 aaPredicted RBP9.46□□□□□ -0.9
COL4A6-201ENST00000334504 TIFABQ6ZNK6 161 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 ZNF280BQ86YH2 543 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 MMAAQ8IVH4 418 aaKnown RBP9.46□□□□□ -0.9
COL4A6-201ENST00000334504 DEFB119Q8N690 84 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 NATD1Q8N6N6 113 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 NIPA2Q8N8Q9 360 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 SEZ6LQ9BYH1 1024 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 OSBPL2Q9H1P3 480 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 TEX10Q9NXF1 929 aaPredicted RBP9.46□□□□□ -0.9
COL4A6-201ENST00000334504 GNG13Q9P2W3 67 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 TMEM59LQ9UK28 342 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 TEX264Q9Y6I9 313 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 PTPRJQ12913 1337 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 LCMT2O60294 686 aaKnown RBP9.46□□□□□ -0.9
COL4A6-201ENST00000334504 AHSA1O95433 338 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 HOXC6P09630 235 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 IL1R2P27930 398 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 CD79BP40259 229 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 HK3P52790 923 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 CASP7P55210 303 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 RFTN1Q14699 578 aaPredicted RBP9.46□□□□□ -0.9
COL4A6-201ENST00000334504 LAS2Q8IYD9 372 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 HS3ST5Q8IZT8 346 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 SPPL2BQ8TCT7 592 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 STRA6Q9BX79 667 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 TBL1XR1Q9BZK7 514 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 ARMC1Q9NVT9 282 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 GTF2IRD1Q9UHL9 959 aa9.46□□□□□ -0.9
COL4A6-201ENST00000334504 ARVCFO00192 962 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 CXCL14O95715 111 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 PDYNP01213 254 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 DLSTP36957 453 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 SIRPB2Q5JXA9 342 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 ZNF678Q5SXM1 525 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 OR7G1Q8NGA0 311 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 CIDECQ96AQ7 238 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 SLC45A3Q96JT2 553 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms