RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 LRRTM2O43300 516 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 CD97P48960 835 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 CDKN1CP49918 316 aaPredicted RBP16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 CASP7P55210 303 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 SHQ1Q6PI26 577 aaKnown RBP16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 TMEM45AQ9NWC5 275 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 PCDHB11Q9Y5F2 797 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 CD3GP09693 182 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 KCNC3Q14003 757 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 VITQ6UXI7 678 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 ACTL8Q9H568 366 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 PRSS51A0A1B0GVH4 220 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 C9J4A7 227 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 H3BSH0 61 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 TMEM63AO94886 807 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 NUDT7P0C024 238 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 PIM3Q86V86 326 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 STK35Q8TDR2 534 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 GPR20Q99678 358 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 SIX3O95343 332 aaPredicted RBP16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 ZNF35P13682 527 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 ACTR1BP42025 376 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 DPCDQ9BVM2 203 aaPredicted RBP16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 DPEP3Q9H4B8 488 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 GRIK2Q13002 908 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 CRHR2Q13324 411 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 RABL3Q5HYI8 236 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 P4HA3Q7Z4N8 544 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 CNIH3Q8TBE1 160 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 TSPEARQ8WU66 669 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 ERVK-18Q9QC07 812 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 ABCC6O95255 1503 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 DLX3O60479 287 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 SLC26A5P58743 744 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 DAOAP59103 153 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 TMEM74Q96NL1 305 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 BRF2Q9HAW0 419 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 FAM198AQ9UFP1 575 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 SPAG17Q6Q759 2223 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 KIAA0513O60268 411 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 ATG12O94817 140 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 CAMLGP49069 296 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 CYCSP99999 105 aaKnown RBP16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 CAP1Q01518 475 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 CCBE1Q6UXH8 406 aaPredicted RBP16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 VRK1Q99986 396 aaPredicted RBP16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 MAGIXQ9H6Y5 334 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 ASB6Q9NWX5 421 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 HOXC8P31273 242 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 TIFABQ6ZNK6 161 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 SLC5A11Q8WWX8 675 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 KCTD13Q8WZ19 329 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 TFAP2BQ92481 460 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 TP63Q9H3D4 680 aaPredicted RBP16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 DUOX1Q9NRD9 1551 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 NCS1P62166 190 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 FUT10Q6P4F1 479 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 TMEM205Q6UW68 189 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 CEACAM19Q7Z692 300 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 SSX3Q99909 188 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 DOHHQ9BU89 302 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 TRBV23OR9-2A0A075B6M9 112 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 OAS1P00973 400 aaKnown RBP16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 VEGFAP15692 232 aaPredicted RBP16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 CELP19835 753 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 LASP1Q14847 261 aaKnown RBP16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 GPRC6AQ5T6X5 926 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 C22orf42Q6IC83 251 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 KIAA1191Q96A73 305 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 ZNF696Q9H7X3 374 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 ZFP57Q9NU63 452 aa16.27■□□□□ 0.2
SMCHD1-201ENST00000320876 BCL9O00512 1426 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 DENRO43583 198 aaKnown RBP16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 EEDO75530 441 aaKnown RBP16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 DLDP09622 509 aaKnown RBP16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 MAP2K4P45985 399 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 SLC39A4Q6P5W5 647 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 ZER1Q7Z7L7 766 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 NAXEQ8NCW5 288 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 BCL7BQ9BQE9 202 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 IRF6O14896 467 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 SEC13P55735 322 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 LRRTM4Q86VH4 590 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 OR4F6Q8NGB9 312 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 C7orf50Q9BRJ6 194 aaKnown RBP16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 G6PC3Q9BUM1 346 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 SLC7A11Q9UPY5 501 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 HSPE1-MOB4S4R3N1 261 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 DIRAS1O95057 198 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 EBLN1P0CF75 366 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 AKR1C8PQ5T2L2 129 aa16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 PPIL3Q9H2H8 161 aaKnown RBP16.27■□□□□ 0.19
SMCHD1-201ENST00000320876 ZNF821O75541 412 aaPredicted RBP16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 EDNRBP24530 442 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 ADH7P40394 386 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 PPP5CP53041 499 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 VARS2Q5ST30 1063 aaKnown RBP16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 OR56A3Q8NH54 315 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 ERVK13-1Q9NX77 482 aa16.26■□□□□ 0.19
SMCHD1-201ENST00000320876 MAFBQ9Y5Q3 323 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms