RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 MAGEA8P43361 318 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 SLAMF1Q13291 335 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 TEAD4Q15561 434 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 NDUFAF5Q5TEU4 345 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 AMER3Q8N944 861 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 NCLNQ969V3 563 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 RNF145Q96MT1 663 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 C9orf16Q9BUW7 83 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 SEMA6AQ9H2E6 1030 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 Q9H521 79 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 TMEM38AQ9H6F2 299 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 SYNPO2LQ9H987 977 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 DNAAF2Q9NVR5 837 aaKnown RBP16.94■□□□□ 0.3
RAB39A-201ENST00000320578 ZSCAN32Q9NX65 697 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 TEX10Q9NXF1 929 aaPredicted RBP16.94■□□□□ 0.3
RAB39A-201ENST00000320578 DLGAP2Q9P1A6 1054 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 POMT2Q9UKY4 750 aa16.94■□□□□ 0.3
RAB39A-201ENST00000320578 C4orf51C9J302 202 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 LMO7DNF2Z398 122 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 PPM1DO15297 605 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 ZSCAN9O15535 394 aaPredicted RBP16.93■□□□□ 0.3
RAB39A-201ENST00000320578 DENRO43583 198 aaKnown RBP16.93■□□□□ 0.3
RAB39A-201ENST00000320578 CTSVO60911 334 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 DEAF1O75398 565 aaPredicted RBP16.93■□□□□ 0.3
RAB39A-201ENST00000320578 TNFRSF21O75509 655 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 DCNP07585 359 aaKnown RBP16.93■□□□□ 0.3
RAB39A-201ENST00000320578 EFNA1P20827 205 aaPredicted RBP16.93■□□□□ 0.3
RAB39A-201ENST00000320578 MAOBP27338 520 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 ELOAQ14241 798 aaKnown RBP16.93■□□□□ 0.3
RAB39A-201ENST00000320578 TMTC4Q5T4D3 741 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 ARMC6Q6NXE6 501 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 TRIM73Q86UV7 250 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 MMP21Q8N119 569 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 C11orf65Q8NCR3 313 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 PYURFQ96I23 114 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 ZNF597Q96LX8 424 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 SEPHS2Q99611 448 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 NLNQ9BYT8 704 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 MIR1-1HGQ9H1L0 117 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 CAAP1Q9H8G2 361 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 COQ10BQ9H8M1 238 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 ERVMER34-1Q9H9K5 563 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 ZNF639Q9UID6 485 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 RPS6KA6Q9UK32 745 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 ARHGEF17Q96PE2 2063 aaPredicted RBP16.93■□□□□ 0.3
RAB39A-201ENST00000320578 CLOCKO15516 846 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 BCKDHBP21953 392 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 KDELR2P33947 212 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 MANFP55145 182 aaKnown RBP16.93■□□□□ 0.3
RAB39A-201ENST00000320578 SUZ12Q15022 739 aaKnown RBP16.93■□□□□ 0.3
RAB39A-201ENST00000320578 ZBTB49Q6ZSB9 765 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 SPRED1Q7Z699 444 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 SLC30A8Q8IWU4 369 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 ARL14Q8N4G2 192 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 ZNF655Q8N720 491 aaPredicted RBP16.93■□□□□ 0.3
RAB39A-201ENST00000320578 OR8K5Q8NH50 307 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 FAM110BQ8TC76 370 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 LMX1AQ8TE12 382 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 UTP15Q8TED0 518 aaKnown RBP16.93■□□□□ 0.3
RAB39A-201ENST00000320578 NEURL3Q96EH8 262 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 SEMA6CQ9H3T2 930 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 SLC35C2Q9NQQ7 365 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 C1GALT1Q9NS00 363 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 GPATCH2Q9NW75 528 aa16.93■□□□□ 0.3
RAB39A-201ENST00000320578 B4DGG1 531 aa16.92■□□□□ 0.3
RAB39A-201ENST00000320578 AQP9O43315 295 aa16.92■□□□□ 0.3
RAB39A-201ENST00000320578 SERPINA1P01009 418 aa16.92■□□□□ 0.3
RAB39A-201ENST00000320578 ZNF10P21506 573 aaPredicted RBP16.92■□□□□ 0.3
RAB39A-201ENST00000320578 LSSP48449 732 aa16.92■□□□□ 0.3
RAB39A-201ENST00000320578 ALDH9A1P49189 494 aa16.92■□□□□ 0.3
RAB39A-201ENST00000320578 AFF3P51826 1226 aaKnown RBP16.92■□□□□ 0.3
RAB39A-201ENST00000320578 SAXO2Q658L1 398 aa16.92■□□□□ 0.3
RAB39A-201ENST00000320578 SFTPA2Q8IWL1 248 aa16.92■□□□□ 0.3
RAB39A-201ENST00000320578 ZFP28Q8NHY6 868 aa16.92■□□□□ 0.3
RAB39A-201ENST00000320578 SLC47A1Q96FL8 570 aa16.92■□□□□ 0.3
RAB39A-201ENST00000320578 SERINC2Q96SA4 455 aa16.92■□□□□ 0.3
RAB39A-201ENST00000320578 SLAMF7Q9NQ25 335 aa16.92■□□□□ 0.3
RAB39A-201ENST00000320578 FAF1Q9UNN5 650 aaPredicted RBP16.92■□□□□ 0.3
RAB39A-201ENST00000320578 DOLKQ9UPQ8 538 aa16.92■□□□□ 0.3
RAB39A-201ENST00000320578 A0A1W2PR48 441 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 PROM1O43490 865 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 NOBOXO60393 691 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 PRKD3O94806 890 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 C1QCP02747 245 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 MAGEA2P43356 314 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 ZXDAP98168 799 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 MED21Q13503 144 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 CEBPEQ15744 281 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.91■□□□□ 0.3
RAB39A-201ENST00000320578 GCNT6Q5T4J0 391 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 ENPP6Q6UWR7 440 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 CBLL1Q75N03 491 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 EIF3MQ7L2H7 374 aaKnown RBP16.91■□□□□ 0.3
RAB39A-201ENST00000320578 FBXO30Q8TB52 745 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 RERGQ96A58 199 aaPredicted RBP16.91■□□□□ 0.3
RAB39A-201ENST00000320578 MACROD1Q9BQ69 325 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 DPH2Q9BQC3 489 aaPredicted RBP16.91■□□□□ 0.3
RAB39A-201ENST00000320578 ASPSCR1Q9BZE9 553 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 CXorf36Q9H7Y0 433 aa16.91■□□□□ 0.3
RAB39A-201ENST00000320578 EVA1BQ9NVM1 165 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms