RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 HPGDSO60760 199 aa13.61□□□□□ -0.23
PABPC1-201ENST00000318607 MLLT3P42568 568 aaPredicted RBP13.61□□□□□ -0.23
PABPC1-201ENST00000318607 PURAQ00577 322 aaKnown RBP13.61□□□□□ -0.23
PABPC1-201ENST00000318607 C1DQ13901 141 aaKnown RBP13.61□□□□□ -0.23
PABPC1-201ENST00000318607 RGNQ15493 299 aa13.61□□□□□ -0.23
PABPC1-201ENST00000318607 ZXDCQ2QGD7 858 aaPredicted RBP13.61□□□□□ -0.23
PABPC1-201ENST00000318607 TIMM50Q3ZCQ8 353 aa13.61□□□□□ -0.23
PABPC1-201ENST00000318607 ADCK2Q7Z695 626 aa13.61□□□□□ -0.23
PABPC1-201ENST00000318607 TMEM173Q86WV6 379 aaPredicted RBP13.61□□□□□ -0.23
PABPC1-201ENST00000318607 SUSD3Q96L08 255 aa13.61□□□□□ -0.23
PABPC1-201ENST00000318607 SAMD11Q96NU1 681 aa13.61□□□□□ -0.23
PABPC1-201ENST00000318607 BRD9Q9H8M2 597 aa13.61□□□□□ -0.23
PABPC1-201ENST00000318607 KLK1P06870 262 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 KIR2DL3P43628 341 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 GSTM5P46439 218 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 P2RX3P56373 397 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 KCNJ10P78508 379 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 ACVR1Q04771 509 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 FGFBP1Q14512 234 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 TAF1CQ15572 869 aaPredicted RBP13.6□□□□□ -0.23
PABPC1-201ENST00000318607 TBCEQ15813 527 aaPredicted RBP13.6□□□□□ -0.23
PABPC1-201ENST00000318607 USP45Q70EL2 814 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 CBLL1Q75N03 491 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 BBS10Q8TAM1 723 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 ZFP3Q96NJ6 502 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 SLC22A12Q96S37 553 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 MAGEH1Q9H213 219 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 NMNAT1Q9HAN9 279 aaPredicted RBP13.6□□□□□ -0.23
PABPC1-201ENST00000318607 DNAJC11Q9NVH1 559 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 CMAHPQ9Y471 501 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 SNX11Q9Y5W9 270 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 CELP19835 753 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 PRPS1L1P21108 318 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 CD72P21854 359 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 CSTF2P33240 577 aaKnown RBP eCLIP13.6□□□□□ -0.233e-7■□□□□ 8.4
PABPC1-201ENST00000318607 PTPN18Q99952 460 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 BCL7BQ9BQE9 202 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 TSSK6Q9BXA6 273 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 POLR2J3Q9H1A7 115 aaKnown RBP13.6□□□□□ -0.23
PABPC1-201ENST00000318607 MAGIXQ9H6Y5 334 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 CAPN10Q9HC96 672 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 PLAGL1Q9UM63 463 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 NDRG2Q9UN36 371 aaKnown RBP13.6□□□□□ -0.23
PABPC1-201ENST00000318607 NAALAD2Q9Y3Q0 740 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 OARD1Q9Y530 152 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 RLFQ13129 1914 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 COCHO43405 550 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 DNAJB5O75953 348 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 ALX3O95076 343 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 CKMP06732 381 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 MAPK1P28482 360 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 OR3A3P47888 321 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 OLR1P78380 273 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 PRKCDQ05655 676 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 SLC5A12Q1EHB4 618 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 SPATS1Q496A3 300 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 CD300LGQ6UXG3 332 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 KRT73Q86Y46 540 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 CCDC28AQ8IWP9 274 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 PHC2Q8IXK0 858 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 ZNF740Q8NDX6 193 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 HMGB4Q8WW32 186 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 FCGR1BQ92637 280 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 RELTQ969Z4 430 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 SIPA1Q96FS4 1042 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 KCNK12Q9HB15 430 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 ZC4H2Q9NQZ6 224 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 ALG5Q9Y673 324 aa13.6□□□□□ -0.23
PABPC1-201ENST00000318607 NPIPB15A6NHN6 443 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-201ENST00000318607 HRO43593 1189 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 AMD1P17707 334 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 POU3F3P20264 500 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-201ENST00000318607 ABATP80404 500 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 CDK6Q00534 326 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 TLE2Q04725 743 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 ZNF79Q15937 498 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 RTP2Q5QGT7 225 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 BCL2L15Q5TBC7 163 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 FAM205BPQ63HN1 556 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 TXNDC8Q6A555 127 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 LACC1Q8IV20 430 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 ARL14EPQ8N8R7 260 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-201ENST00000318607 OR52P1PQ8NH57 321 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 LRRC20Q8TCA0 184 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 TRIM63Q969Q1 353 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 CLEC4EQ9ULY5 219 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 CYP2A6P11509 494 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-201ENST00000318607 PRPS2P11908 318 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 RFX3P48380 749 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 ITGA1P56199 1179 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 TAS2R50P59544 299 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 FCHO2Q0JRZ9 810 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 MPPE1Q53F39 396 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 IDNKQ5T6J7 187 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 MAMSTRQ6ZN01 415 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 ZNF683Q8IZ20 524 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 DPCDQ9BVM2 203 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-201ENST00000318607 FAM83DQ9H4H8 585 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 RNF121Q9H920 327 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 PCDHGB1Q9Y5G3 927 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms