RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 IPMKQ8NFU5 416 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 TMEM125Q96AQ2 219 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF669Q96BR6 464 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-201ENST00000316433 UPRTQ96BW1 309 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 FCRL1Q96LA6 429 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 MRGPRX2Q96LB1 330 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 WDFY2Q96P53 400 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 SLC38A3Q99624 504 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 CHCHD6Q9BRQ6 235 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 CD244Q9BZW8 370 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 DHX35Q9H5Z1 703 aaKnown RBP6.39□□□□□ -1.39
ZNF540-201ENST00000316433 KRT84Q9NSB2 600 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 VSX1Q9NZR4 365 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF624Q9P2J8 865 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-201ENST00000316433 XPR1Q9UBH6 696 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 DHRS7Q9Y394 339 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 CLCA3PQ9Y6N3 262 aa6.39□□□□□ -1.39
ZNF540-201ENST00000316433 SCN10AQ9Y5Y9 1956 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 FAM95CA0A1B0GW59 222 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 FAM221BA6H8Z2 402 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 H7C0S8 307 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 SCAMP3O14828 347 aaKnown RBP6.38□□□□□ -1.39
ZNF540-201ENST00000316433 TCAPO15273 167 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 B4GALT5O43286 388 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 PLOD3O60568 738 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 SOX30O94993 753 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 F2P00734 622 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 MBP02144 154 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 HRGP04196 525 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 FHP07954 510 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 PVALBP20472 110 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-201ENST00000316433 VEPH1Q14D04 833 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 FCN2Q15485 313 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.38□□□□□ -1.39
ZNF540-201ENST00000316433 ZNF284Q2VY69 593 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 THEM4Q5T1C6 240 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 MZT2BQ6NZ67 158 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 FAM131AQ6UXB0 335 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 SEZ6L2Q6UXD5 910 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 CLEC20AQ6ZU45 233 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 TRMT11Q7Z4G4 463 aaKnown RBP6.38□□□□□ -1.39
ZNF540-201ENST00000316433 MFSD6LQ8IWD5 586 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 LAX1Q8IWV1 398 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 TMEM192Q8IY95 271 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 NAGSQ8N159 534 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 PRR18Q8N4B5 295 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 C12orf29Q8N999 325 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 OR9I1Q8NGQ6 314 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 WDR20Q8TBZ3 569 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 C14orf144Q96I85 54 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 AGAP2Q99490 1192 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 MARVELD1Q9BSK0 173 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 NCOR1P1Q9H4R4 102 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 PRDM5Q9NQX1 630 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-201ENST00000316433 KLHL1Q9NR64 748 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 RBFOX1Q9NWB1 397 aaKnown RBP6.38□□□□□ -1.39
ZNF540-201ENST00000316433 MAP10Q9P2G4 905 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 GHRLQ9UBU3 117 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 MBD1Q9UIS9 605 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-201ENST00000316433 SAMHD1Q9Y3Z3 626 aaKnown RBP6.38□□□□□ -1.39
ZNF540-201ENST00000316433 TDRD15B5MCY1 1934 aaKnown RBP6.38□□□□□ -1.39
ZNF540-201ENST00000316433 SYNJ2BP-COX16A0A087WUM0 186 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 FAM240BA0A1B0GVZ2 78 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 TMEM233B4DJY2 109 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 M0QZQ0 153 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 PER2O15055 1255 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 KIAA0513O60268 411 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 MAFKO60675 156 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 KERAO60938 352 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 MT-CYBP00156 380 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-201ENST00000316433 ANXA6P08133 673 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 NMBP08949 121 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 ANXA3P12429 323 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 CYP4B1P13584 511 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 ERCC2P18074 760 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 TYMPP19971 482 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 LHCGRP22888 699 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 SLC6A2P23975 617 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 PDHA2P29803 388 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 PTGFRP43088 359 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 GSK3BP49841 420 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 HNRNPKP61978 463 aaKnown RBP eCLIP6.38□□□□□ -1.39
ZNF540-201ENST00000316433 GLYR1Q49A26 553 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-201ENST00000316433 FAM74A1Q5RGS3 127 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 CMC1Q7Z7K0 106 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 SERINC5Q86VE9 423 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 RNF130Q86XS8 419 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 ABI1Q8IZP0 508 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 DEFB106AQ8N104 65 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 FBXO22Q8NEZ5 403 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 SNX33Q8WV41 574 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 BTN2A2Q8WVV5 523 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 NSMCE2Q96MF7 247 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 SFXN2Q96NB2 322 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 COL21A1Q96P44 957 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 OMDQ99983 421 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 EVA1AQ9H8M9 152 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 FOLH1BQ9HBA9 442 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 LATS2Q9NRM7 1088 aa6.38□□□□□ -1.39
ZNF540-201ENST00000316433 PIM2Q9P1W9 311 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms