RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 EEF1DP3Q658K8 133 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 NOXRED1Q6NXP6 359 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 FAM136AQ96C01 138 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 PYCR2Q96C36 320 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 MED30Q96HR3 178 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 MTG2Q9H4K7 406 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 PELI2Q9HAT8 420 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 PREBQ9HCU5 417 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 TMPRSS4Q9NRS4 437 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 SAGE1Q9NXZ1 904 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 MRPS23Q9Y3D9 190 aaKnown RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 YJEFN3A6XGL0 299 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 PIPP12273 146 aaPredicted RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 CRHR2Q13324 411 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF516Q92618 1163 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 PHB2Q99623 299 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 LOC285095A0A1B0GVY8 99 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 TTC24A2A3L6 582 aaPredicted RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 IFNA1P01562 189 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF823P16415 610 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 ADCYAP1R1P41586 468 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 RPS15AP62244 130 aaKnown RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 ARHGAP1Q07960 439 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 GDPD4Q6W3E5 623 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 GPAT4Q86UL3 456 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 TSEN15Q8WW01 171 aaKnown RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 LRCH3Q96II8 777 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 TTYH2Q9BSA4 534 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 SLC28A3Q9HAS3 691 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 SMURF1Q9HCE7 757 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 XPNPEP2O43895 674 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 PAHP00439 452 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 CHRM1P11229 460 aaPredicted RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 ACRV1P26436 265 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 DNASE1L1P49184 302 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 DCDC1P59894 354 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 SRPXP78539 464 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 PLIN5Q00G26 463 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 CSTF1Q05048 431 aaKnown RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 GBX1Q14549 363 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 CEACAM20Q6UY09 585 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 OR10H4Q8NGA5 316 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 Q9N2J8 555 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 DOCK9Q9BZ29 2069 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 LOC285556D6RIA3 1793 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 OR2AT4A6NND4 320 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 SCDO00767 359 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 OR4F21O95013 312 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 PNMTP11086 282 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 GABRA5P31644 462 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 PLA2G16P53816 162 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 GDF10P55107 478 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 WNT4P56705 351 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 LRP8Q14114 963 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 GRB14Q14449 540 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 CARD16Q5EG05 197 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 DHRS4L2Q6PKH6 230 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 C12orf40Q86WS4 652 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 OR56B4Q8NH76 319 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 ADAMTS14Q8WXS8 1223 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 TXNDC15Q96J42 360 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF587Q96SQ5 575 aaPredicted RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 ACSS1Q9NUB1 689 aaPredicted RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 C1orf226A1L170 272 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 TBC1D3BA6NDS4 549 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SPTLC1O15269 473 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 AGAP6Q5VW22 663 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 C11orf96Q7Z7L8 435 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SLC22A16Q86VW1 577 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 ASB15Q8WXK1 588 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 AGAP4Q96P64 663 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 ANKMY1Q9P2S6 941 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 FOXE1O00358 373 aaPredicted RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 MAP3K8P41279 467 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 PAQR3Q6TCH7 311 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 COMMD2Q86X83 199 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 MRPL41Q8IXM3 137 aaKnown RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 TRMT2BQ96GJ1 504 aaKnown RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 NECAB3Q96P71 396 aaPredicted RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SPIN2AQ99865 258 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SPIN2BQ9BPZ2 258 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 CPEB1Q9BZB8 566 aaKnown RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 GMPR2Q9P2T1 348 aaKnown RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 RIMS3Q9UJD0 308 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 PPT2Q9UMR5 302 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 SIPA1L1O43166 1804 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 TRBC2A0A5B9 178 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 RPS17P08708 135 aaKnown RBP8.48□□□□□ -1.05
COL6A5-202ENST00000312481 CYP4B1P13584 511 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 S100A2P29034 98 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 GGT2P36268 569 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 BTG1P62324 171 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 KCNAB2Q13303 367 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 ENPP2Q13822 863 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 TPGS1Q6ZTW0 290 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 CCDC54Q8NEL0 328 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 OR52N2Q8NGI0 321 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 PRRT1Q99946 306 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF224Q9NZL3 707 aa8.48□□□□□ -1.05
COL6A5-202ENST00000312481 WASHC1A8K0Z3 465 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms