RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 TSPAN6O43657 245 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 PDE9AO76083 593 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 CTNNB1P35222 781 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 PTGES3Q15185 160 aaKnown RBP13.97□□□□□ -0.17
PTPN9-201ENST00000306726 IFI44LQ53G44 452 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 COQ5Q5HYK3 327 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 DPY19L3Q6ZPD9 716 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 PRSS48Q7RTY5 328 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 ZZZ3Q8IYH5 903 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 OR8H1Q8NGG4 311 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 TSPEARQ8WU66 669 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 FOPNLQ96NB1 174 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 ANKRA2Q9H9E1 313 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 C2orf92A0A1B0GVN3 265 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 FAM220BPB1ANY3 271 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 FAM47E-STBD1D6RA91 191 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 ARNTLO00327 626 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 SCO1O75880 301 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 C7P10643 843 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 HBA1P69905 142 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 LSM11P83369 360 aaKnown RBP eCLIP13.97□□□□□ -0.17
PTPN9-201ENST00000306726 SLBPQ14493 270 aaKnown RBP eCLIP13.97□□□□□ -0.17
PTPN9-201ENST00000306726 KRT33BQ14525 404 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 ZMYND11Q15326 602 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 ATG9BQ674R7 924 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 TSPYL5Q86VY4 417 aaPredicted RBP13.97□□□□□ -0.17
PTPN9-201ENST00000306726 NLRP8Q86W28 1048 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 OR6C4Q8NGE1 309 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 BBS10Q8TAM1 723 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 ADAMTS16Q8TE57 1224 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 DNAJA3Q96EY1 480 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 TRIB3Q96RU7 358 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 CDADC1Q9BWV3 514 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 QRSL1Q9H0R6 528 aaKnown RBP13.97□□□□□ -0.17
PTPN9-201ENST00000306726 MMP27Q9H306 513 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 TMED5Q9Y3A6 229 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 M0R082 166 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 PRPS1L1P21108 318 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 HOXC13P31276 330 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 GSTM5P46439 218 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 CDK6Q00534 326 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 ATAT1Q5SQI0 421 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 BRAT1Q6PJG6 821 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 TMEM220Q6QAJ8 160 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 IL20RBQ6UXL0 311 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 ASCC1Q8N9N2 400 aaKnown RBP13.96□□□□□ -0.17
PTPN9-201ENST00000306726 SLC9A6Q92581 669 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 RACGAP1Q9H0H5 632 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 LSM7Q9UK45 103 aaKnown RBP13.96□□□□□ -0.17
PTPN9-201ENST00000306726 SSR3Q9UNL2 185 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 ZNF840PA6NDX5 716 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 PCP4L1A6NKN8 68 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 NUAK1O60285 661 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 FGF18O76093 207 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 HPRP00739 348 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 JUNBP17275 347 aaPredicted RBP13.96□□□□□ -0.17
PTPN9-201ENST00000306726 HOXA9P31269 272 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 HTR2BP41595 481 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 C1DQ13901 141 aaKnown RBP13.96□□□□□ -0.17
PTPN9-201ENST00000306726 KLHL12Q53G59 568 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 AGTRAPQ6RW13 159 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 DNAJB7Q7Z6W7 309 aaPredicted RBP13.96□□□□□ -0.17
PTPN9-201ENST00000306726 TEX26Q8N6G2 289 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 HUS1BQ8NHY5 278 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 POLR2J3Q9H1A7 115 aaKnown RBP13.96□□□□□ -0.17
PTPN9-201ENST00000306726 OARD1Q9Y530 152 aa13.96□□□□□ -0.17
PTPN9-201ENST00000306726 TMEM265A0A087WTH1 108 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 SAGE2PA6NJ88 616 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 CLCA1A8K7I4 914 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 ARHGAP33O14559 1287 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 PLD2O14939 933 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 NTN1O95631 604 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 CTSAP10619 480 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 ACRV1P26436 265 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 NSG1P42857 185 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 ERVK-21P61565 698 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 GPR17Q13304 367 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 INSL4Q14641 139 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 GCNT6Q5T4J0 391 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 SLC8B1Q6J4K2 584 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 CEACAM20Q6UY09 585 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 CERS6Q6ZMG9 384 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 WDR48Q8TAF3 677 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 KLK6Q92876 244 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 PEX16Q9Y5Y5 336 aa13.96□□□□□ -0.18
PTPN9-201ENST00000306726 ANKRD34BA5PLL1 514 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 SMAD9O15198 467 aaKnown RBP13.95□□□□□ -0.18
PTPN9-201ENST00000306726 KMOO15229 486 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 NR2F1P10589 423 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 PRPS2P11908 318 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 RPS19P39019 145 aaKnown RBP13.95□□□□□ -0.18
PTPN9-201ENST00000306726 QPRTQ15274 297 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 BAK1Q16611 211 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 USP45Q70EL2 814 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 NPAS3Q8IXF0 933 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 SEC14L3Q9UDX4 400 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 SPATA2Q9UM82 520 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 ASF1AQ9Y294 204 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 IRAK3Q9Y616 596 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 RANBP2P49792 3224 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms