RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 MAP3K3Q99759 626 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ZBTB20Q9HC78 741 aaPredicted RBP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 SLAMF7Q9NQ25 335 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 PRDM6Q9NQX0 595 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 PPP4R1LQ9P1A2 415 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 KIF13BQ9NQT8 1826 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ZNF726A6NNF4 738 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 KLF11O14901 512 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 SCO2O43819 266 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 CDC40O60508 579 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 UGDHO60701 494 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 KLHL18O94889 574 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 SOX30O94993 753 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 SNX4O95219 450 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 PRG2P13727 222 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ENDOUP21128 410 aaKnown RBP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 MNX1P50219 401 aaPredicted RBP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ABRAXAS2Q15018 415 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 BCL7AQ4VC05 210 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 FLYWCH1Q4VC44 716 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 PYCR3Q53H96 274 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ULK2Q8IYT8 1036 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 DEPDC4Q8N2C3 294 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 OR52J3Q8NH60 311 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 GRHL3Q8TE85 626 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 DIO2Q92813 273 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 KAT2AQ92830 837 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ALOXE3Q9BYJ1 711 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 GIMAP2Q9UG22 337 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 PCTPQ9UKL6 214 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 WBP11Q9Y2W2 641 aaKnown RBP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 PLEKHM1Q9Y4G2 1056 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 NSG1A0A0A6YYJ2 146 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 FADS2P1A8MWK0 482 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 H7C0S8 307 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 TNFRSF11BO00300 401 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ARHGAP33O14559 1287 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ADAMDEC1O15204 470 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 EMC8O43402 210 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 CLEC3AO75596 197 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 CISD3P0C7P0 127 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ACTR3P61158 418 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 CTSL3PQ5NE16 218 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 TMEM92Q6UXU6 159 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 FBXW8Q8N3Y1 598 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 NUP43Q8NFH3 380 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 CGREF1Q99674 301 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ZNF395Q9H8N7 513 aaPredicted RBP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 CLN6Q9NWW5 311 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 IKZF3Q9UKT9 509 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 GMPPBQ9Y5P6 360 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 HCRTR2O43614 444 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 SIGLEC6O43699 453 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 PGM3O95394 542 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 SYNGR4O95473 234 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 CTSLP07711 333 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ERCC1P07992 297 aaPredicted RBP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 CR2P20023 1033 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 CDK6Q00534 326 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 IZUMO2Q6UXV1 221 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 SFRP1Q8N474 314 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 TMEM234Q8WY98 164 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 LYSMD1Q96S90 227 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 LRRC3Q9BY71 257 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 TPRKBQ9Y3C4 175 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 NAALAD2Q9Y3Q0 740 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 SCN1AP35498 2009 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 CXorf51AA0A1B0GTR3 108 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 C9P02748 559 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 CERS1P27544 350 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 ZNF423Q2M1K9 1284 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 NDUFAF5Q5TEU4 345 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 TTC23Q5W5X9 447 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 RAB11FIP2Q7L804 512 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 COMMD6Q7Z4G1 85 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 IP6K3Q96PC2 410 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 KPNA4O00629 521 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-202ENST00000306042 CPNE3O75131 537 aaKnown RBP8.84□□□□□ -0.99
PTPRE-202ENST00000306042 NME6O75414 186 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-202ENST00000306042 BCKDHAP12694 445 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 ACADSP16219 412 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 C5orf22Q49AR2 442 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 METTL2BQ6P1Q9 378 aaKnown RBP8.84□□□□□ -0.99
PTPRE-202ENST00000306042 PTERQ96BW5 349 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 CTRCQ99895 268 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 SLITRK2Q9H156 845 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 IGSF5Q9NSI5 407 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 SNX11Q9Y5W9 270 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 SCN10AQ9Y5Y9 1956 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 H0YGG7 62 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 AHSA1O95433 338 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 UQCRC2P22695 453 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 CDH12P55289 794 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 ARF3P61204 181 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-202ENST00000306042 DCDP81605 110 aaKnown RBP8.84□□□□□ -0.99
PTPRE-202ENST00000306042 SLC34A1Q06495 639 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.84□□□□□ -0.99
PTPRE-202ENST00000306042 IER5LQ5T953 404 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms