RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 C12orf40Q86WS4 652 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 CYP4Z2PQ8N1L4 340 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 LSM14AQ8ND56 463 aaKnown RBP10.46□□□□□ -0.73
LSM3-201ENST00000306024 TEX37Q96LM6 180 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 BARD1Q99728 777 aaKnown RBP10.46□□□□□ -0.73
LSM3-201ENST00000306024 SPRTNQ9H040 489 aaPredicted RBP10.46□□□□□ -0.73
LSM3-201ENST00000306024 PPA2Q9H2U2 334 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 FARSBQ9NSD9 589 aaKnown RBP10.46□□□□□ -0.73
LSM3-201ENST00000306024 CLEC1BQ9P126 229 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 ADAM30Q9UKF2 790 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 UTS2RQ9UKP6 389 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 GPR45Q9Y5Y3 372 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 PTPRDP23468 1912 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 FFAR3O14843 346 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 GPR42O15529 346 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 TRBC1P01850 177 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 FABP3P05413 133 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 TRAPPC2P0DI81 140 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 TRAPPC2BP0DI82 140 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 UROSP10746 265 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 G6PDP11413 515 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 PBLDP30039 288 aaPredicted RBP10.46□□□□□ -0.73
LSM3-201ENST00000306024 SSTR4P31391 388 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 ETV1P50549 477 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 ZNF81P51508 661 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 CXCR4P61073 352 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 RHAGQ02094 409 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 EFR3AQ14156 821 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 FLYWCH1Q4VC44 716 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 SYTL3Q4VX76 610 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 DDI2Q5TDH0 399 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 CFAP77Q6ZQR2 320 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 TSPYL5Q86VY4 417 aaPredicted RBP10.46□□□□□ -0.73
LSM3-201ENST00000306024 OR6C4Q8NGE1 309 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 OR14C36Q8NHC7 312 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 MARK1Q9P0L2 795 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 A3GALT2U3KPV4 340 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 TBC1D3DA0A087WVF3 549 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 TBC1D3IA0A087WXS9 549 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 TBC1D3EA0A087X179 549 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 TBC1D3KA0A087X1G2 549 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 LOC285095A0A1B0GVY8 99 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 TBC1D3FA6NER0 549 aaPredicted RBP10.46□□□□□ -0.74
LSM3-201ENST00000306024 TBC1D3LB9A6J9 549 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 MYL12BO14950 172 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 SH3BP5O60239 455 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 GREM1O60565 184 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 TBC1D3HP0C7X1 549 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 GLULP15104 373 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 MYL12AP19105 171 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 DNAJA1P31689 397 aaKnown RBP10.46□□□□□ -0.74
LSM3-201ENST00000306024 S100A3P33764 101 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 GPR1P46091 355 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 SCRN3Q0VDG4 424 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 PTPRRQ15256 657 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 ZNF805Q5CZA5 627 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 TBC1D3GQ6DHY5 549 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 TBC1D3CQ6IPX1 549 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 ADIPOR2Q86V24 386 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 TBC1D3Q8IZP1 549 aaPredicted RBP10.46□□□□□ -0.74
LSM3-201ENST00000306024 TMEM151AQ8N4L1 468 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 HDDC3Q8N4P3 179 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 C2CD4AQ8NCU7 369 aaPredicted RBP10.46□□□□□ -0.74
LSM3-201ENST00000306024 NXPE3Q969Y0 559 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 ISG20Q96AZ6 181 aaKnown RBP10.46□□□□□ -0.74
LSM3-201ENST00000306024 AP2M1Q96CW1 435 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 PYURFQ96I23 114 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 MAGEB10Q96LZ2 347 aaPredicted RBP10.46□□□□□ -0.74
LSM3-201ENST00000306024 CDK15Q96Q40 435 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 COPS8Q99627 209 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 MGLLQ99685 303 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 FAM83CQ9BQN1 747 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 PLA2G2FQ9BZM2 168 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 EVA1BQ9NVM1 165 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 GPR83Q9NYM4 423 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 ZNF624Q9P2J8 865 aaPredicted RBP10.46□□□□□ -0.74
LSM3-201ENST00000306024 COMMD3Q9UBI1 195 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 ZNF639Q9UID6 485 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 CMAHPQ9Y471 501 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 STON1Q9Y6Q2 735 aa10.46□□□□□ -0.74
LSM3-201ENST00000306024 ZFC3H1O60293 1989 aaKnown RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 PRRT4C9JH25 899 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 C9P02748 559 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 ADRA1AP35348 466 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 PIK3CGP48736 1102 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 ALDH6A1Q02252 535 aaKnown RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 RPL6Q02878 288 aaKnown RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 GPR19Q15760 415 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 ZSWIM7Q19AV6 140 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 C10orf62Q5T681 223 aaPredicted RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 BICRALQ6AI39 1079 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 TRMT11Q7Z4G4 463 aaKnown RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 ANKRD46Q86W74 232 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 RIMKLAQ8IXN7 391 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 TTYH1Q9H313 450 aaPredicted RBP10.45□□□□□ -0.74
LSM3-201ENST00000306024 MFSD1Q9H3U5 465 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 ARNT2Q9HBZ2 717 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 C1orf109Q9NX04 203 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 HSPE1-MOB4S4R3N1 261 aa10.45□□□□□ -0.74
LSM3-201ENST00000306024 NCOR1O75376 2440 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms