RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SPACA6W5XKT8 324 aa23.11■■□□□ 1.29
HOXC9-201ENST00000303450 JRKO75564 520 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 FHP07954 510 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 RAB38P57729 211 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 KLC1Q07866 573 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 ERV3-1Q14264 604 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 OR2T11Q8NH01 316 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 ADAMTS18Q8TE60 1221 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 STARD8Q92502 1023 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 SLC45A3Q96JT2 553 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 MAPKAP1Q9BPZ7 522 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 LRTM1Q9HBL6 345 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 SLCO1B3Q9NPD5 702 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 LYARQ9NX58 379 aaKnown RBP23.1■■□□□ 1.29
HOXC9-201ENST00000303450 DMXL2Q8TDJ6 3036 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 SCN2AQ99250 2005 aa23.1■■□□□ 1.29
HOXC9-201ENST00000303450 SEC22BO75396 215 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 CREG1O75629 220 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 FAM58BPP0C7Q3 252 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 JAK1P23458 1154 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 PRPH2P23942 346 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 TPP2P29144 1249 aaPredicted RBP23.09■■□□□ 1.29
HOXC9-201ENST00000303450 TLE3Q04726 772 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 MINDY4Q4G0A6 757 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 XKR7Q5GH72 579 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 RGS9BPQ6ZS82 235 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 GPR180Q86V85 440 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 EFCAB3Q8N7B9 438 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 PIWIL2Q8TC59 973 aaKnown RBP23.09■■□□□ 1.29
HOXC9-201ENST00000303450 PPP1R36Q96LQ0 422 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 CRB3Q9BUF7 120 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 RIC8BQ9NVN3 520 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 C1orf109Q9NX04 203 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 KCMF1Q9P0J7 381 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 PHF11Q9UIL8 331 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 MKL2Q9ULH7 1088 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 SSUH2Q9Y2M2 353 aa23.09■■□□□ 1.29
HOXC9-201ENST00000303450 ANKRD11Q6UB99 2663 aaPredicted RBP23.09■■□□□ 1.29
HOXC9-201ENST00000303450 A0A087WV48 116 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 ATP6AP2A0A1C7CYW4 349 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 SLCO1B7G3V0H7 640 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 TMPRSS11DO60235 418 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 ATP6AP2O75787 350 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 CDC123O75794 336 aaPredicted RBP23.08■■□□□ 1.29
HOXC9-201ENST00000303450 MYO1DO94832 1006 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 JUNP05412 331 aaKnown RBP23.08■■□□□ 1.29
HOXC9-201ENST00000303450 MAPK12P53778 367 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 GUCY1A3Q02108 690 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 GALNTL6Q49A17 601 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 FAM47EQ6ZV65 393 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 LAPTM4BQ86VI4 370 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 FAM47BQ8NA70 645 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 METTL2AQ96IZ6 378 aaKnown RBP23.08■■□□□ 1.29
HOXC9-201ENST00000303450 C3orf30Q96M34 536 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 NUF2Q9BZD4 464 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 MS4A12Q9NXJ0 267 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 VTI1BQ9UEU0 232 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 MCM8Q9UJA3 840 aa23.08■■□□□ 1.29
HOXC9-201ENST00000303450 MRPS33Q9Y291 106 aaKnown RBP23.08■■□□□ 1.29
HOXC9-201ENST00000303450 NPIPB8E9PQR5 432 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 FAM227AF5H4B4 570 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 LSM1O15116 133 aaKnown RBP23.08■■□□□ 1.28
HOXC9-201ENST00000303450 PCDH7O60245 1069 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 B4GALT2O60909 372 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 HEXBP07686 556 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 CPN2P22792 545 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 TUBB8Q3ZCM7 444 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 MRM1Q6IN84 353 aaKnown RBP23.08■■□□□ 1.28
HOXC9-201ENST00000303450 CCDC81Q6ZN84 652 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 ZSCAN1Q8NBB4 408 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 TUBGCP3Q96CW5 907 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 PPP3R2Q96LZ3 170 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 CNTNAP3BQ96NU0 1288 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 CNTNAP3Q9BZ76 1288 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 SIRT5Q9NXA8 310 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 C3orf18Q9UK00 162 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 ASB4Q9Y574 426 aa23.08■■□□□ 1.28
HOXC9-201ENST00000303450 GNG14A0A1W2PPG7 69 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 IDSB3KWA1 339 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 TCP11X1B4DZS4 312 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 HDAC3O15379 428 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 UMODP07911 640 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 WT1P19544 449 aaPredicted RBP23.07■■□□□ 1.28
HOXC9-201ENST00000303450 ITPKBP27987 946 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 TIA1P31483 386 aaKnown RBP eCLIP23.07■■□□□ 1.28
HOXC9-201ENST00000303450 EMP2P54851 167 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 HNRNPH2P55795 449 aaKnown RBP23.07■■□□□ 1.28
HOXC9-201ENST00000303450 MC1RQ01726 317 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 SSPNQ14714 243 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 ATP6AP1LQ52LC2 224 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 GALNT18Q6P9A2 607 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 TMEM151BQ8IW70 566 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 C11orf24Q96F05 449 aaPredicted RBP23.07■■□□□ 1.28
HOXC9-201ENST00000303450 CSF3RQ99062 836 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 EBPLQ9BY08 206 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 LANCL2Q9NS86 450 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 ZMIZ1Q9ULJ6 1067 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 ATG4BQ9Y4P1 393 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 ZFHX4Q86UP3 3567 aa23.07■■□□□ 1.28
HOXC9-201ENST00000303450 ZNF891A8MT65 544 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms