RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CAPN5O15484 640 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-201ENST00000302528 MLLT10P55197 1068 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 CDH15P55291 814 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 PPP1R8Q12972 351 aaKnown RBP10.03□□□□□ -0.8
CLIP1-201ENST00000302528 RAB31Q13636 194 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 NADK2Q4G0N4 442 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 PIGGQ5H8A4 983 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 VARS2Q5ST30 1063 aaKnown RBP10.03□□□□□ -0.8
CLIP1-201ENST00000302528 UGT2A3Q6UWM9 527 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF662Q6ZS27 426 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 GPR149Q86SP6 731 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 THOC6Q86W42 341 aaKnown RBP10.03□□□□□ -0.8
CLIP1-201ENST00000302528 OR56A3Q8NH54 315 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 NPLOC4Q8TAT6 608 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 PYURFQ96I23 114 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 GCM1Q9NP62 436 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 SERTAD4Q9NUC0 356 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 MGAT4CQ9UBM8 478 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 B4GALT7Q9UBV7 327 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 SLC22A14Q9Y267 594 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 GRID2O43424 1007 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 NIPSNAP2O75323 286 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 MTX2O75431 263 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 RPL17P18621 184 aaKnown RBP10.03□□□□□ -0.8
CLIP1-201ENST00000302528 OXTRP30559 389 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 NRIP1P48552 1158 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 TRAM2Q15035 370 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 RSU1Q15404 277 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF630Q2M218 657 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-201ENST00000302528 ITPRIPL2Q3MIP1 535 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 APOBEC3HQ6NTF7 200 aaKnown RBP10.03□□□□□ -0.8
CLIP1-201ENST00000302528 PAQR3Q6TCH7 311 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 RASGEF1CQ8N431 466 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 TCEANCQ8N8B7 351 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 OR1F2PQ96R84 312 aa10.03□□□□□ -0.8
CLIP1-201ENST00000302528 A8MXE2 369 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 CENPBD1B2RD01 187 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 EEF1E1-BLOC1S5C9J1V9 151 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 LDB2O43679 373 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 RFPL1O75677 317 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 SH3PXD2AQ5TCZ1 1133 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 GID4Q8IVV7 300 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 MRPL41Q8IXM3 137 aaKnown RBP10.02□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF619Q8N2I2 560 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 OR13C4Q8NGS5 318 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 THAP4Q8WY91 577 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 POT1Q9NUX5 634 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 TLR6Q9Y2C9 796 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 MON2Q7Z3U7 1717 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 C3P01024 1663 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 TOXO94900 526 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 ATE1O95260 518 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 TGM6O95932 706 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 CD48P09326 243 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 GDI1P31150 447 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 DGKQP52824 942 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 SH3RF2Q8TEC5 729 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 ASB15Q8WXK1 588 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 HOXB13Q92826 284 aaPredicted RBP10.02□□□□□ -0.8
CLIP1-201ENST00000302528 KREMEN1Q96MU8 473 aa10.02□□□□□ -0.8
CLIP1-201ENST00000302528 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-201ENST00000302528 SH3PXD2BA1X283 911 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 DIRAS1O95057 198 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 DNASE1P24855 282 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 CHRNB4P30926 498 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 PRKXP51817 358 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 IRF9Q00978 393 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 RIPPLY1Q0D2K3 151 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 DACT2Q5SW24 774 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 GSG1LQ6UXU4 331 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 ACBD4Q8NC06 268 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 C2orf15Q8WU43 125 aaKnown RBP10.02□□□□□ -0.81
CLIP1-201ENST00000302528 SHDQ96IW2 340 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 C11orf84Q9BUA3 381 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-201ENST00000302528 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-201ENST00000302528 STRADBQ9C0K7 418 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 GPR88Q9GZN0 384 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 KCNH6Q9H252 994 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 MTG2Q9H4K7 406 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 ZIM2Q9NZV7 527 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 DISP2A7MBM2 1401 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 MEIS2O14770 477 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 AKR1C4P17516 323 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 MLLT1Q03111 559 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-201ENST00000302528 LASP1Q14847 261 aaKnown RBP10.02□□□□□ -0.81
CLIP1-201ENST00000302528 DUSP28Q4G0W2 176 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 NIPAL1Q6NVV3 410 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 PRSS55Q6UWB4 352 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-201ENST00000302528 OR51D1Q8NGF3 324 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 IL31RAQ8NI17 732 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 GLYATL1Q969I3 302 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 ZDHHC12Q96GR4 267 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 MCHR1Q99705 422 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 DPEP3Q9H4B8 488 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 AKTIPQ9H8T0 292 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 EIF2B3Q9NR50 452 aaKnown RBP10.02□□□□□ -0.81
CLIP1-201ENST00000302528 RHCGQ9UBD6 479 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 FZD10Q9ULW2 581 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 TP53TG5Q9Y2B4 290 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 TMED5Q9Y3A6 229 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms