RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 PRAMEF10O60809 474 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 BCHEP06276 602 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 GPC1P35052 558 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 CDH12P55289 794 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 CDK6Q00534 326 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 PRDX1Q06830 199 aaKnown RBP13.88□□□□□ -0.19
SMG8-201ENST00000300917 RPE65Q16518 533 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 TTC23Q5W5X9 447 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 GPR153Q6NV75 609 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 KIAA1958Q8N8K9 716 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 NPLQ9BXD5 320 aaPredicted RBP13.88□□□□□ -0.19
SMG8-201ENST00000300917 CCDC88CQ9P219 2028 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 CKAP5Q14008 2032 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 TCRBV21S2A2A0A5A6 115 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 BTN3A3O00478 584 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 NDUFV2P19404 249 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 CCR3P51677 355 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 SNRPNP63162 240 aaKnown RBP13.88□□□□□ -0.19
SMG8-201ENST00000300917 KCNJ10P78508 379 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 PCDH1Q08174 1060 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 HTR4Q13639 388 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 ZNF793Q6ZN11 406 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 UBE3DQ7Z6J8 389 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 HIPK1Q86Z02 1210 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 RAB42Q8N4Z0 105 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 OR5D16Q8NGK9 328 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 KCNC2Q96PR1 638 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 NLNQ9BYT8 704 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 AICDAQ9GZX7 198 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 CHST8Q9H2A9 424 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 CXorf21Q9HAI6 301 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 AMBNQ9NP70 447 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 NDUFA13Q9P0J0 144 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 TRPC4Q9UBN4 977 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 COMMD3-BMI1R4GMX3 469 aa13.88□□□□□ -0.19
SMG8-201ENST00000300917 KIAA1549LQ6ZVL6 1849 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 M0R129 80 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 CAPN5O15484 640 aaPredicted RBP13.87□□□□□ -0.19
SMG8-201ENST00000300917 ALDH3B2P48448 385 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 RAB39AQ14964 217 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 GPR155Q7Z3F1 870 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 SHISA5Q8N114 240 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 HORMAD2Q8N7B1 307 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 LCN9Q8WX39 176 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 SLC6A20Q9NP91 592 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 KRT84Q9NSB2 600 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 A0A1B0GVG6 124 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 FAM227AF5H4B4 570 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 H0YAE9 185 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 PDPK1O15530 556 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 CXCR2P25025 360 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 TNFRSF4P43489 277 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 RAD23AP54725 363 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 SPIBQ01892 262 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 DEFB119Q8N690 84 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 CHDHQ8NE62 594 aaPredicted RBP13.87□□□□□ -0.19
SMG8-201ENST00000300917 OR52N2Q8NGI0 321 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 VANGL1Q8TAA9 524 aaPredicted RBP13.87□□□□□ -0.19
SMG8-201ENST00000300917 TM9SF3Q9HD45 589 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 RLIMQ9NVW2 624 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 CD207Q9UJ71 328 aa13.87□□□□□ -0.19
SMG8-201ENST00000300917 C9P02748 559 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 FEN1P39748 380 aaKnown RBP13.86□□□□□ -0.19
SMG8-201ENST00000300917 REEP5Q00765 189 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 KIAA1614Q5VZ46 1190 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 TRIM40Q6P9F5 258 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 SHQ1Q6PI26 577 aaKnown RBP13.86□□□□□ -0.19
SMG8-201ENST00000300917 TMEM184AQ6ZMB5 413 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 Q6ZS52 159 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 WDR53Q7Z5U6 358 aaPredicted RBP13.86□□□□□ -0.19
SMG8-201ENST00000300917 CAMKMTQ7Z624 323 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 NUDT13Q86X67 352 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 XAGE5Q8WWM1 108 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 RGMAQ96B86 450 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 DOHHQ9BU89 302 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 CTPS2Q9NRF8 586 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 C1GALT1Q9NS00 363 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 WARS2Q9UGM6 360 aaKnown RBP13.86□□□□□ -0.19
SMG8-201ENST00000300917 NCKAP1Q9Y2A7 1128 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 SLC17A4Q9Y2C5 497 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 TICRRQ7Z2Z1 1910 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 SCN2AQ99250 2005 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 PRAMEF25A6NGN4 478 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 TMEM229AB2RXF0 380 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 PGRMC2O15173 223 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 TNFRSF21O75509 655 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 C7P10643 843 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 DDCP20711 480 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 PEBP1P30086 187 aaKnown RBP13.86□□□□□ -0.19
SMG8-201ENST00000300917 MAGEA2P43356 314 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 GRSF1Q12849 480 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMG8-201ENST00000300917 PDE7AQ13946 482 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 CCDC85BQ15834 202 aaPredicted RBP13.86□□□□□ -0.19
SMG8-201ENST00000300917 DUSP7Q16829 419 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 C6orf141Q5SZD1 244 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 NDUFAF5Q5TEU4 345 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 CCDC81Q6ZN84 652 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 KCT2Q8NC54 265 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 ABHD11Q8NFV4 315 aa13.86□□□□□ -0.19
SMG8-201ENST00000300917 ZCCHC10Q8TBK6 192 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms