RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 VSX2P58304 361 aaPredicted RBP11.4□□□□□ -0.59
ERCC1-202ENST00000300853 TAF10Q12962 218 aa11.4□□□□□ -0.59
ERCC1-202ENST00000300853 BEST4Q8NFU0 473 aa11.4□□□□□ -0.59
ERCC1-202ENST00000300853 XAGE5Q8WWM1 108 aa11.4□□□□□ -0.59
ERCC1-202ENST00000300853 ZNF607Q96SK3 696 aa11.4□□□□□ -0.59
ERCC1-202ENST00000300853 TBX5Q99593 518 aa11.4□□□□□ -0.59
ERCC1-202ENST00000300853 TM9SF2Q99805 663 aa11.4□□□□□ -0.59
ERCC1-202ENST00000300853 FUZQ9BT04 418 aa11.4□□□□□ -0.59
ERCC1-202ENST00000300853 CNOT2Q9NZN8 540 aaKnown RBP11.4□□□□□ -0.59
ERCC1-202ENST00000300853 SLC23A1Q9UHI7 598 aa11.4□□□□□ -0.59
ERCC1-202ENST00000300853 TLR6Q9Y2C9 796 aa11.4□□□□□ -0.59
ERCC1-202ENST00000300853 TNRC6CQ9HCJ0 1690 aaKnown RBP11.4□□□□□ -0.59
ERCC1-202ENST00000300853 PRRC2BQ5JSZ5 2229 aaKnown RBP11.39□□□□□ -0.59
ERCC1-202ENST00000300853 LOC285095A0A1B0GVY8 99 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 ZNF670-ZNF695F2Z2N8 137 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 PCDH17O14917 1159 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 CH25HO95992 272 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 CATP04040 527 aaKnown RBP11.39□□□□□ -0.59
ERCC1-202ENST00000300853 GBAP04062 536 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 CSF3P09919 207 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 ALPIP09923 528 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 PRG2P13727 222 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 ALAS2P22557 587 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 KELP23276 732 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 HLA-DMAP28067 261 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 GRK4P32298 578 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 HK3P52790 923 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 RGS1Q08116 209 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 SERINC3Q13530 473 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 NAGSQ8N159 534 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 ATAD1Q8NBU5 361 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 NXPE2Q96DL1 559 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 LRR1Q96L50 414 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 GMLQ99445 158 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 NIPSNAP1Q9BPW8 284 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 MCMBPQ9BTE3 642 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 PDGFDQ9GZP0 370 aaPredicted RBP11.39□□□□□ -0.59
ERCC1-202ENST00000300853 SLC6A15Q9H2J7 730 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 PCDHB16Q9NRJ7 776 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 CLEC2DQ9UHP7 191 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 NDRG2Q9UN36 371 aaKnown RBP11.39□□□□□ -0.59
ERCC1-202ENST00000300853 PLCL2Q9UPR0 1127 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 COL14A1Q05707 1796 aaKnown RBP11.39□□□□□ -0.59
ERCC1-202ENST00000300853 FXYD6-FXYD2A0A087WZ82 144 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 CD8B2A6NJW9 211 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 IL1AP01583 271 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 SRPRAP08240 638 aaKnown RBP11.39□□□□□ -0.59
ERCC1-202ENST00000300853 CD8BP10966 210 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 DRD5P21918 477 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 RPL9P32969 192 aaKnown RBP11.39□□□□□ -0.59
ERCC1-202ENST00000300853 RPS24P62847 133 aaKnown RBP11.39□□□□□ -0.59
ERCC1-202ENST00000300853 GINS1Q14691 196 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 NDUFAF6Q330K2 333 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 FRMPD2BQ6IN97 320 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 SHFQ7M4L6 423 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 TMPRSS11BQ86T26 416 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 SLITRK4Q8IW52 837 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 IQCF1Q8N6M8 205 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 MTMR14Q8NCE2 650 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.39□□□□□ -0.593e-8■■■■■ 42.4
ERCC1-202ENST00000300853 USP7Q93009 1102 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 ZSWIM3Q96MP5 696 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 FXYD6Q9H0Q3 95 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 SLC28A3Q9HAS3 691 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 FNIP2Q9P278 1114 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 PTPRFP10586 1907 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 OR7A17O14581 309 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 MAPKAPK2P49137 400 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 MANFP55145 182 aaKnown RBP11.39□□□□□ -0.59
ERCC1-202ENST00000300853 C19orf57Q0VDD7 668 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 ZNF680Q8NEM1 530 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 GANCQ8TET4 914 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 IGSF8Q969P0 613 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 MYO19Q96H55 970 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 ACPTQ9BZG2 426 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 OR51J1Q9H342 316 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 BRD9Q9H8M2 597 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 ACSL6Q9UKU0 697 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 EP400Q96L91 3159 aa11.39□□□□□ -0.59
ERCC1-202ENST00000300853 EVPLQ92817 2033 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 A0A0D9SEW6 157 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 SAP18O00422 153 aaKnown RBP11.38□□□□□ -0.59
ERCC1-202ENST00000300853 CDK2AP1O14519 115 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 PCDH7O60245 1069 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 USP2O75604 605 aaPredicted RBP11.38□□□□□ -0.59
ERCC1-202ENST00000300853 OR5F1O95221 314 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 CRISP3P54108 245 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 GBX1Q14549 363 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 CCDC157Q569K6 752 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 MEDAGQ5VYS4 303 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 KAT2AQ92830 837 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 MAGEH1Q9H213 219 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 KLHL31Q9H511 634 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 NMNAT1Q9HAN9 279 aaPredicted RBP11.38□□□□□ -0.59
ERCC1-202ENST00000300853 RLIMQ9NVW2 624 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 TMEM248Q9NWD8 314 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 MED11Q9P086 117 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 ST3GAL5Q9UNP4 418 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 ACTL7AQ9Y615 435 aa11.38□□□□□ -0.59
ERCC1-202ENST00000300853 TEX46H3BTG2 121 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms