RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 FAM72AQ5TYM5 149 aa6.66□□□□□ -1.34
GAPVD1-202ENST00000297933 FAM72DQ6L9T8 149 aa6.66□□□□□ -1.34
GAPVD1-202ENST00000297933 TMEM214Q6NUQ4 689 aaKnown RBP6.66□□□□□ -1.34
GAPVD1-202ENST00000297933 SLC2A7Q6PXP3 512 aa6.66□□□□□ -1.34
GAPVD1-202ENST00000297933 ZNF227Q86WZ6 799 aa6.66□□□□□ -1.34
GAPVD1-202ENST00000297933 FAM72BQ86X60 149 aa6.66□□□□□ -1.34
GAPVD1-202ENST00000297933 LRRC58Q96CX6 371 aa6.66□□□□□ -1.34
GAPVD1-202ENST00000297933 MS4A4AQ96JQ5 239 aa6.66□□□□□ -1.34
GAPVD1-202ENST00000297933 TMEM74Q96NL1 305 aa6.66□□□□□ -1.34
GAPVD1-202ENST00000297933 CGREF1Q99674 301 aa6.66□□□□□ -1.34
GAPVD1-202ENST00000297933 MCHR1Q99705 422 aa6.66□□□□□ -1.34
GAPVD1-202ENST00000297933 SPEF2Q9C093 1822 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 RGPD8O14715 1765 aaPredicted RBP6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 FAM172BPA6NC97 362 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 M0QX08 132 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 VILLO15195 856 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 HRGP04196 525 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 CSN2P05814 226 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 CHRM5P08912 532 aaPredicted RBP6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 ZNF35P13682 527 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 CD38P28907 300 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 SPINT3P49223 89 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 MRPS21P82921 87 aaKnown RBP6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 MERTKQ12866 999 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 C6orf52Q5T4I8 152 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 DUS1LQ6P1R4 473 aaKnown RBP6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 NXPE4Q6UWF7 544 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 RBM44Q6ZP01 1051 aaKnown RBP6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 CHST14Q8NCH0 376 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 OR6C4Q8NGE1 309 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 OMA1Q96E52 524 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 HHIPL1Q96JK4 782 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 SCGB3A2Q96PL1 93 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 GPR22Q99680 433 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 RTP3Q9BQQ7 232 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 TPT1P8Q9HAU6 139 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 COL2A1P02458 1487 aaPredicted RBP6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 H3BSH0 61 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 AREL1O15033 823 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 DFNA5O60443 496 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 IL3P08700 152 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 OR12D1P0DN82 309 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 SRCP12931 536 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 GLP1RP43220 463 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 UFM1P61960 85 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 NFE2L1Q14494 772 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 TMEM107Q6UX40 140 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 TMEFF1Q8IYR6 380 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 OR56A3Q8NH54 315 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 HSPBAP1Q96EW2 488 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 DNAJA3Q96EY1 480 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 TTYH2Q9BSA4 534 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 WDR12Q9GZL7 423 aaKnown RBP6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 FN3KQ9H479 309 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 ERVK-18Q9QC07 812 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 CYTH4Q9UIA0 394 aa6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 WBP11Q9Y2W2 641 aaKnown RBP6.65□□□□□ -1.34
GAPVD1-202ENST00000297933 PRSS51A0A1B0GVH4 220 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 CXorf49A8MYA2 514 aaPredicted RBP6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 SOX30O94993 753 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 RAB36O95755 333 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 H2BFMP0C1H6 154 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 G6PDP11413 515 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 HOXA11P31270 313 aaPredicted RBP6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 CEBPGP53567 150 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 ADARP55265 1226 aaKnown RBP6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 SHC2P98077 582 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 TRAM2Q15035 370 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 CDKN3Q16667 212 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 PQLC3Q8N755 202 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 RLN3Q8WXF3 142 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 DENND2DQ9H6A0 471 aaPredicted RBP6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 NUMBLQ9Y6R0 609 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 METTL21EPA6NDL7 271 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 PTGESO14684 152 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 TFECO14948 347 aaPredicted RBP6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 AIREO43918 545 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 NUAK1O60285 661 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 DLX3O60479 287 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 S1PR4O95977 384 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 IGHEP01854 428 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 GGT2P36268 569 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 CLDN2P57739 230 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 GRIN2CQ14957 1233 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 MAD2L1BPQ15013 274 aaPredicted RBP6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 MLF2Q15773 248 aaPredicted RBP6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 SLC36A3Q495N2 470 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 FAM182AQ5T1J6 154 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 CWF19L1Q69YN2 538 aaKnown RBP6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 ZER1Q7Z7L7 766 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 FAM156AQ8NDB6 213 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 OR6N2Q8NGY6 317 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 TRMT10AQ8TBZ6 339 aaKnown RBP6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 SPRYD4Q8WW59 207 aaPredicted RBP6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 RAB8BQ92930 207 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 GAL3ST3Q96A11 431 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 LRCH3Q96II8 777 aa6.65□□□□□ -1.35
GAPVD1-202ENST00000297933 NODALQ96S42 347 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms