RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ELOVL1Q9BW60 279 aa4.34□□□□□ -1.71
CD44-202ENST00000278385 OSBPL10Q9BXB5 764 aa4.34□□□□□ -1.71
CD44-202ENST00000278385 FRMD8P1Q9BZ68 369 aaPredicted RBP4.34□□□□□ -1.71
CD44-202ENST00000278385 CDCP1Q9H5V8 836 aa4.34□□□□□ -1.71
CD44-202ENST00000278385 UCK1Q9HA47 277 aa4.34□□□□□ -1.71
CD44-202ENST00000278385 HHATLQ9HCP6 504 aa4.34□□□□□ -1.71
CD44-202ENST00000278385 APMAPQ9HDC9 416 aa4.34□□□□□ -1.71
CD44-202ENST00000278385 NRBP2Q9NSY0 501 aa4.34□□□□□ -1.71
CD44-202ENST00000278385 NDUFA13Q9P0J0 144 aa4.34□□□□□ -1.71
CD44-202ENST00000278385 SEMA5BQ9P283 1151 aa4.34□□□□□ -1.71
CD44-202ENST00000278385 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.34□□□□□ -1.71
CD44-202ENST00000278385 ELP1O95163 1332 aa4.34□□□□□ -1.71
CD44-202ENST00000278385 FOCADQ5VW36 1801 aa4.34□□□□□ -1.71
CD44-202ENST00000278385 MYH1P12882 1939 aa4.34□□□□□ -1.71
CD44-202ENST00000278385 PTPRFP10586 1907 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 ZSWIM8A7E2V4 1837 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 DDX60LQ5H9U9 1706 aaKnown RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 ABCB11O95342 1321 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 NEDD4P46934 1319 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 MROH7Q68CQ1 1323 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 A0A0J9YYE9 177 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 A0A0U1RRA0 63 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 MBLAC1A4D2B0 266 aaPredicted RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 ARHGEF35A5YM69 484 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 FAM90A10PA6NDY2 464 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 CBY3A6NI87 242 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 ZAR1LA6NP61 321 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 A8MUI8 341 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 CES2O00748 559 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 PRAMEF11O60813 436 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 JRKO75564 520 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 CABYRO75952 493 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 SORBS2O94875 1100 aaKnown RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 ECDO95905 644 aaPredicted RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 MBD3O95983 291 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 NUDT3O95989 172 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 MT-CYBP00156 380 aaPredicted RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 LDLRP01130 860 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 TRBC1P01850 177 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 CLTAP09496 248 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 ANKRD34CP0C6C1 535 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 DANCRP0C864 163 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 FCGR2AP12318 317 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 SRMP19623 302 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 MSR1P21757 451 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 UCP1P25874 307 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 HLA-FP30511 346 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 FCGR2BP31994 310 aaPredicted RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 FOLR3P41439 243 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 GRIA1P42261 906 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 NPBWR1P48145 328 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 RGS4P49798 205 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 ACLYP53396 1101 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 GSCP56915 257 aaPredicted RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 B2MP61769 119 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 POLR2LP62875 67 aaKnown RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 MRPS34P82930 218 aaKnown RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 CBX1P83916 185 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 MC2RQ01718 297 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 ROR2Q01974 943 aaKnown RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 CNTN2Q02246 1040 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 CSTF1Q05048 431 aaKnown RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 CACNG1Q06432 222 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 DNASE1L3Q13609 305 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 ENPP2Q13822 863 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 CYLC2Q14093 348 aaPredicted RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 MAPK6Q16659 721 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 SOWAHAQ2M3V2 549 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 KIF19Q2TAC6 998 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 HSP90AA4PQ58FG1 418 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 TEDDM1Q5T9Z0 273 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 PRAMEF5Q5TYX0 476 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 PRAMEF6Q5VXH4 476 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 SEL1L3Q68CR1 1132 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 CLEC6AQ6EIG7 209 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 TTC23LQ6PF05 361 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 SCARA5Q6ZMJ2 495 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 ANKRD33Q7Z3H0 272 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 ASPGQ86U10 573 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 LDLRAD3Q86YD5 345 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 TMEM126BQ8IUX1 230 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 IZUMO1Q8IYV9 350 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 ADGRG5Q8IZF4 528 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 TDHQ8IZJ6 230 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 DSELQ8IZU8 1212 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 LNX2Q8N448 690 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 SCAIQ8N9R8 606 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 SPATA4Q8NEY3 305 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 WIPF2Q8TF74 440 aaPredicted RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 GDPD5Q8WTR4 605 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 MAP4K1Q92918 833 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 MSI2Q96DH6 328 aaKnown RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 ZNF479Q96JC4 524 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 APOLD1Q96LR9 279 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 SPATA33Q96N06 139 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 BBS4Q96RK4 519 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 OLFM1Q99784 485 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 KCNS3Q9BQ31 491 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 ATG101Q9BSB4 218 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 DUSP26Q9BV47 211 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms