RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PELOQ9BRX2 385 aaKnown RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 OR51I1Q9H343 314 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SRRDQ9UH36 339 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ZDHHC2Q9UIJ5 367 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF536O15090 1300 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 IGLV3-22A0A075B6J6 115 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 PLD2O14939 933 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 RNF13O43567 381 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 HRGP04196 525 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 CCL23P55773 120 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 TGFBIQ15582 683 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 KCTD18Q6PI47 426 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 RPLP0P6Q8NHW5 317 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 POC1BQ8TC44 478 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM234Q8WY98 164 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 FBXL20Q96IG2 436 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 HBEGFQ99075 208 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 PTGES2Q9H7Z7 377 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SIRPGQ9P1W8 387 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 MYBPHLA2RUH7 354 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF821O75541 412 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 GDI2P50395 445 aaKnown RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 POU6F2P78424 691 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 KANK2Q63ZY3 851 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 NCCRP1Q6ZVX7 275 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 HAVCR2Q8TDQ0 301 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 KLRG1Q96E93 195 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM41AQ96HV5 264 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SULT4A1Q9BR01 284 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 DOHHQ9BU89 302 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 CD244Q9BZW8 370 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 CCINQ13939 588 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ALG10BQ5I7T1 473 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 AADACL4Q5VUY2 407 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 HMBOX1Q6NT76 420 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 FAM198BQ6UWH4 519 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 KCNJ9Q92806 393 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 RIOK2Q9BVS4 552 aaKnown RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 KCNH6Q9H252 994 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 EDARQ9UNE0 448 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SEC16AO15027 2179 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 AK1P00568 194 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 GJA1P17302 382 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 FRKP42685 505 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 MLLT6P55198 1093 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 TLE3Q04726 772 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 CHADLQ6NUI6 762 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 UGT2A3Q6UWM9 527 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF767PQ75MW2 155 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 P4HA3Q7Z4N8 544 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 GKN2Q86XP6 184 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 HSPBAP1Q96EW2 488 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 TSNAXQ99598 290 aaKnown RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 DPYSL5Q9BPU6 564 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 APOBEC3GQ9HC16 384 aaKnown RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 DHDHQ9UQ10 334 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 MAP2K3P46734 347 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 HSD11B2P80365 405 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 MRPL49Q13405 166 aaKnown RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 UNQ6126/PRO20091Q6UXV3 157 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 RBM12BQ8IXT5 1001 aaKnown RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 NLGN2Q8NFZ4 835 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 SYT4Q9H2B2 425 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 FZD8Q9H461 694 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 DPEP2Q9H4A9 486 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 A0A1B0GV50 99 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 GPR25O00155 361 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 RFPL1O75677 317 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 CD3GP09693 182 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 SGCBQ16585 318 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 MYLK3Q32MK0 819 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 LYSMD3Q7Z3D4 306 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 PHTF2Q8N3S3 785 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 PMEPA1Q969W9 287 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 NPLQ9BXD5 320 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 IGKV6D-41A0A0C4DH26 115 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 ACTR1AP61163 376 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 FBXO48Q5FWF7 155 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 RHEBL1Q8TAI7 183 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 KLHL15Q96M94 604 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 HS6ST2Q96MM7 605 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 RBP7Q96R05 134 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 CENPMQ9NSP4 180 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 GSKIPQ9P0R6 139 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 RIPK3Q9Y572 518 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 TP53BP1Q12888 1972 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 PHRF1Q9P1Y6 1649 aaKnown RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 TRAV6A0A075B6T7 132 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 EEF1E1O43324 174 aaKnown RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 GSRP00390 522 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 CHRNA1P02708 482 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 PABPC4LP0CB38 370 aaKnown RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 SMPD1P17405 629 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 CRISP1P54107 249 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 LASP1Q14847 261 aaKnown RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 C2orf76Q3KRA6 126 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 CDKN2AIPNLQ96HQ2 116 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 REEP4Q9H6H4 257 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 METTL7AQ9H8H3 244 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 PIGVQ9NUD9 493 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms