RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 DDX5P17844 614 aaKnown RBP15.8■□□□□ 0.12
CCDC40-201ENST00000269318 CHI3L1P36222 383 aaPredicted RBP15.8■□□□□ 0.12
CCDC40-201ENST00000269318 VLDLRP98155 873 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 ILF3Q12906 894 aaKnown RBP eCLIP15.8■□□□□ 0.12
CCDC40-201ENST00000269318 GAS6Q14393 721 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 IQCCQ4KMZ1 466 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 LIN52Q52LA3 116 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 PRRT3Q5FWE3 981 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 PJA1Q8NG27 643 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 OR2L5Q8NG80 312 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 UCN3Q969E3 161 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 SDCCAG3Q96C92 435 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 RDH12Q96NR8 316 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 RAD21L1Q9H4I0 556 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 SMURF2Q9HAU4 748 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 MAP4K5Q9Y4K4 846 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 ERI3O43414 337 aaKnown RBP15.8■□□□□ 0.12
CCDC40-201ENST00000269318 TNFP01375 233 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 FABP3P05413 133 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 THRBP10828 461 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 DRD2P14416 443 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 HIST1H1TP22492 207 aaPredicted RBP15.8■□□□□ 0.12
CCDC40-201ENST00000269318 AQP1P29972 269 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 SOAT1P35610 550 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 KCNJ10P78508 379 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 PPP1R8Q12972 351 aaKnown RBP15.8■□□□□ 0.12
CCDC40-201ENST00000269318 EIF2B5Q13144 721 aaKnown RBP15.8■□□□□ 0.12
CCDC40-201ENST00000269318 BIRC2Q13490 618 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 KIR2DS3Q14952 304 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 NDUFAF5Q5TEU4 345 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 SAXO2Q658L1 398 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 MRM1Q6IN84 353 aaKnown RBP15.8■□□□□ 0.12
CCDC40-201ENST00000269318 SPESP1Q6UW49 350 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 PIWIL3Q7Z3Z3 882 aaKnown RBP15.8■□□□□ 0.12
CCDC40-201ENST00000269318 SLC22A18Q96BI1 424 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 KCNC2Q96PR1 638 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 TRAPPC9Q96Q05 1148 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 ORAI3Q9BRQ5 295 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 GPR174Q9BXC1 333 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 TCEAL2Q9H3H9 227 aaPredicted RBP15.8■□□□□ 0.12
CCDC40-201ENST00000269318 TM9SF3Q9HD45 589 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 NEUROD4Q9HD90 331 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 SIRT3Q9NTG7 399 aaPredicted RBP15.8■□□□□ 0.12
CCDC40-201ENST00000269318 EHD3Q9NZN3 535 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 MYRFQ9Y2G1 1151 aa15.8■□□□□ 0.12
CCDC40-201ENST00000269318 SPTY2D1-AS1A0A0U1RR47 76 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 NOBOXO60393 691 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 CLPTM1O96005 669 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 CD6P30203 668 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 MANFP55145 182 aaKnown RBP15.79■□□□□ 0.12
CCDC40-201ENST00000269318 SCARB2Q14108 478 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 GPR18Q14330 331 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 MLC1Q15049 377 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 TOR1AIP1Q5JTV8 583 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 ANKRD34AQ69YU3 496 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 OR2T5Q6IEZ7 315 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 SHQ1Q6PI26 577 aaKnown RBP15.79■□□□□ 0.12
CCDC40-201ENST00000269318 CCDC80Q76M96 950 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 PATL1Q86TB9 770 aaKnown RBP15.79■□□□□ 0.12
CCDC40-201ENST00000269318 FRMD1Q8N878 549 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 OR2T29Q8NH02 315 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 PSMA8Q8TAA3 256 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 EXOSC8Q96B26 276 aaKnown RBP15.79■□□□□ 0.12
CCDC40-201ENST00000269318 NEURL3Q96EH8 262 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 RMND5BQ96G75 393 aaPredicted RBP15.79■□□□□ 0.12
CCDC40-201ENST00000269318 C7orf34Q96L11 122 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 OR2A14Q96R47 310 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 RBM4BQ9BQ04 359 aaKnown RBP15.79■□□□□ 0.12
CCDC40-201ENST00000269318 RBM4Q9BWF3 364 aaKnown RBP15.79■□□□□ 0.12
CCDC40-201ENST00000269318 NLNQ9BYT8 704 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 LMAN1LQ9HAT1 526 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 ACSS1Q9NUB1 689 aaPredicted RBP15.79■□□□□ 0.12
CCDC40-201ENST00000269318 ADPRHL2Q9NX46 363 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 APOBEC3BQ9UH17 382 aaKnown RBP15.79■□□□□ 0.12
CCDC40-201ENST00000269318 ASB4Q9Y574 426 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 PCDHGA2Q9Y5H1 932 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 SNX11Q9Y5W9 270 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 FANCMQ8IYD8 2048 aa15.79■□□□□ 0.12
CCDC40-201ENST00000269318 OR2A25A4D2G3 310 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 hCG_2039718K7EN88 272 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 SUV39H1O43463 412 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 FKBP9O95302 570 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 ALBP02768 609 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 PABPC4LP0CB38 370 aaKnown RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 ARAFP10398 606 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 ATP5A1P25705 553 aaKnown RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 FZD5Q13467 585 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 SLC9A5Q14940 896 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 ZNF630Q2M218 657 aaPredicted RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 ZIK1Q3SY52 487 aaPredicted RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 VN1R4Q7Z5H5 301 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 HIPK1Q86Z02 1210 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 ACOT4Q8N9L9 421 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 OR8K5Q8NH50 307 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 NFKBIDQ8NI38 313 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 ZFPM2Q8WW38 1151 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 ZBED6CLQ96FA7 236 aaPredicted RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 DOHHQ9BU89 302 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 CA14Q9ULX7 337 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 DUSP12Q9UNI6 340 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms