RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 MYO1DO94832 1006 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 MLYCDO95822 493 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 EPORP19235 508 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 CD22P20273 847 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 ZNF10P21506 573 aaPredicted RBP9.08□□□□□ -0.96
VPS41-201ENST00000265745 NME2P22392 152 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 HPDP32754 393 aaPredicted RBP9.08□□□□□ -0.96
VPS41-201ENST00000265745 SPRP35270 261 aaPredicted RBP9.08□□□□□ -0.96
VPS41-201ENST00000265745 CASP2P42575 452 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 HSPA7P48741 367 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 HLCSP50747 726 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 GPR143P51810 404 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 HNRNPFP52597 415 aaKnown RBP9.08□□□□□ -0.96
VPS41-201ENST00000265745 RELBQ01201 579 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 ALDH6A1Q02252 535 aaKnown RBP9.08□□□□□ -0.96
VPS41-201ENST00000265745 CAV1Q03135 178 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 C2orf54Q08AI8 447 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 ART3Q13508 389 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 DOC2AQ14183 400 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 TERF2Q15554 542 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 TRADDQ15628 312 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 TBCCQ15814 346 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 MAPKAPK3Q16644 382 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 KBTBD12Q3ZCT8 623 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 XKR6Q5GH73 641 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 RNFT1Q5M7Z0 435 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 GRTP1Q5TC63 336 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 ADNP2Q6IQ32 1131 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 MTFR2Q6P444 385 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 ABHD17CQ6PCB6 329 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.08□□□□□ -0.96
VPS41-201ENST00000265745 ISCA2Q86U28 154 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 SPPL2CQ8IUH8 684 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 CTAGE3PQ8IX95 158 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 PDPRQ8NCN5 879 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 TMEM52Q8NDY8 209 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 B3GNT7Q8NFL0 401 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 FBXO25Q8TCJ0 367 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 ADAMTS18Q8TE60 1221 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 CCT6BQ92526 530 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 PTCD3Q96EY7 689 aaKnown RBP9.08□□□□□ -0.96
VPS41-201ENST00000265745 PRDM7Q9NQW5 492 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 PRTFDC1Q9NRG1 225 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 PNO1Q9NRX1 252 aaKnown RBP9.08□□□□□ -0.96
VPS41-201ENST00000265745 CD274Q9NZQ7 290 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 SUCOQ9UBS9 1254 aaKnown RBP9.08□□□□□ -0.96
VPS41-201ENST00000265745 NPIPA1Q9UND3 350 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 UTP11Q9Y3A2 253 aaKnown RBP9.08□□□□□ -0.96
VPS41-201ENST00000265745 ASB1Q9Y576 335 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 KLF2Q9Y5W3 355 aaPredicted RBP9.08□□□□□ -0.96
VPS41-201ENST00000265745 MYO9AB2RTY4 2548 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 DIDO1Q9BTC0 2240 aaKnown RBP9.08□□□□□ -0.96
VPS41-201ENST00000265745 PRSS44E7EML9 344 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 HNRNPRO43390 633 aaKnown RBP9.07□□□□□ -0.96
VPS41-201ENST00000265745 CTNSO60931 367 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 SLC35E2BP0CK96 405 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 PPP2R1BP30154 601 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 CASQ1P31415 396 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 GMPRP36959 345 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 MAGEA4P43358 317 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 CLCN2P51788 898 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 MTTPP55157 894 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 CASP6P55212 293 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 LIM2P55344 173 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 RAB38P57729 211 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 ETF1P62495 437 aaKnown RBP9.07□□□□□ -0.96
VPS41-201ENST00000265745 IRF8Q02556 426 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 GUCY2DQ02846 1103 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 PCDH1Q08174 1060 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 DLG1Q12959 904 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 SLC13A2Q13183 592 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 CHIT1Q13231 466 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 E2F2Q14209 437 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 C3AR1Q16581 482 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 PDK4Q16654 411 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 TRIM40Q6P9F5 258 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 ZDHHC24Q6UX98 284 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 RPTNQ6XPR3 784 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 Q6ZPB1 254 aaPredicted RBP9.07□□□□□ -0.96
VPS41-201ENST00000265745 UBE3DQ7Z6J8 389 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 MRGPRGQ86SM5 289 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 TICAM1Q8IUC6 712 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 CHERPQ8IWX8 916 aaKnown RBP9.07□□□□□ -0.96
VPS41-201ENST00000265745 ZNF595Q8IYB9 648 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 ZNF808Q8N4W9 903 aaPredicted RBP9.07□□□□□ -0.96
VPS41-201ENST00000265745 PPM1NQ8N819 430 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 SNX31Q8N9S9 440 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 FAM98AQ8NCA5 519 aaKnown RBP9.07□□□□□ -0.96
VPS41-201ENST00000265745 STAG3L4Q8TBR4 150 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 F2RL3Q96RI0 385 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 SERINC2Q96SA4 455 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 EFCAB11Q9BUY7 163 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 CD244Q9BZW8 370 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 ALG9Q9H6U8 611 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 ZNF395Q9H8N7 513 aaPredicted RBP9.07□□□□□ -0.96
VPS41-201ENST00000265745 ZFAND3Q9H8U3 227 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 KCMF1Q9P0J7 381 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 SH3BGRL2Q9UJC5 107 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 TINAGQ9UJW2 476 aa9.07□□□□□ -0.96
VPS41-201ENST00000265745 ZNF223Q9UK11 482 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms