RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 EXOSC8Q96B26 276 aaKnown RBP12.95□□□□□ -0.34
VMP1-201ENST00000262291 BMFQ96LC9 184 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 C17orf62Q9BQA9 187 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 ZNF717Q9BY31 904 aaPredicted RBP12.95□□□□□ -0.34
VMP1-201ENST00000262291 ANKRD60Q9BZ19 345 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 AICDAQ9GZX7 198 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 TTYH1Q9H313 450 aaPredicted RBP12.95□□□□□ -0.34
VMP1-201ENST00000262291 EXD2Q9NVH0 621 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 TAAR2Q9P1P5 351 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 SCN3AQ9NY46 2000 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 TMPRSS11DO60235 418 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 RAB28P51157 221 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 RGNQ15493 299 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 CHRDL2Q6WN34 429 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 BTLAQ7Z6A9 289 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 SERPINA11Q86U17 422 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 RNF130Q86XS8 419 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 DNAJB8Q8NHS0 232 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 C1QTNF7Q9BXJ2 289 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 MS4A8Q9BY19 250 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 CXorf21Q9HAI6 301 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 SLAMF7Q9NQ25 335 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 LHX9Q9NQ69 397 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 TEX10Q9NXF1 929 aaPredicted RBP12.95□□□□□ -0.34
VMP1-201ENST00000262291 ATP6V1HQ9UI12 483 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 POU2F3Q9UKI9 436 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 DNMT3AQ9Y6K1 912 aaPredicted RBP12.95□□□□□ -0.34
VMP1-201ENST00000262291 VCANP13611 3396 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 SPEGQ15772 3267 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 ARHGEF17Q96PE2 2063 aaPredicted RBP12.94□□□□□ -0.34
VMP1-201ENST00000262291 H0YJX3 145 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 HAT1O14929 419 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 AQP9O43315 295 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 RETP07949 1114 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 PEBP1P30086 187 aaKnown RBP12.94□□□□□ -0.34
VMP1-201ENST00000262291 KDELR2P33947 212 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 POLR2IP36954 125 aaKnown RBP12.94□□□□□ -0.34
VMP1-201ENST00000262291 BCL6P41182 706 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 TRIM16LQ309B1 348 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 UAP1L1Q3KQV9 507 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 SLC36A3Q495N2 470 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 PERM1Q5SV97 790 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 ANXA8L1Q5VT79 327 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 TTC33Q6PID6 262 aaPredicted RBP12.94□□□□□ -0.34
VMP1-201ENST00000262291 MSANTD1Q6ZTZ1 278 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 UBE3DQ7Z6J8 389 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 GALNT5Q7Z7M9 940 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 ZDHHC13Q8IUH4 622 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 Q8N9G6 341 aaPredicted RBP12.94□□□□□ -0.34
VMP1-201ENST00000262291 PATE1Q8WXA2 126 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 UBE2E3Q969T4 207 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 HSH2DQ96JZ2 352 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 OR2M4Q96R27 311 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 TIMM29Q9BSF4 260 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 SLC6A20Q9NP91 592 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 GIN1Q9NXP7 522 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 BTNL2Q9UIR0 455 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 LAMA1P25391 3075 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 ISM1B1AKI9 464 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 C4orf51C9J302 202 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 B4GAT1O43505 415 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 HS6ST1O60243 411 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 MITFO75030 526 aaPredicted RBP12.94□□□□□ -0.34
VMP1-201ENST00000262291 SULT1C4O75897 302 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 ALPPL2P10696 532 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 GABRG2P18507 467 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 BSGP35613 385 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 CHI3L1P36222 383 aaPredicted RBP12.94□□□□□ -0.34
VMP1-201ENST00000262291 ACTR1BP42025 376 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 PCYT1AP49585 367 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 CRYBA2P53672 197 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 ACTR1AP61163 376 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 VLDLRP98155 873 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 REEP5Q00765 189 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 HSPB3Q12988 150 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 PMS2P3Q13401 168 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 DAG1Q14118 895 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 ARHGAP19Q14CB8 494 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 CLPPQ16740 277 aaPredicted RBP12.94□□□□□ -0.34
VMP1-201ENST00000262291 SLC44A2Q8IWA5 706 aaPredicted RBP12.94□□□□□ -0.34
VMP1-201ENST00000262291 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.94□□□□□ -0.34
VMP1-201ENST00000262291 PACRGLQ8N7B6 248 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 OTUB1Q96FW1 271 aaPredicted RBP12.94□□□□□ -0.34
VMP1-201ENST00000262291 ARPC5LQ9BPX5 153 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 DPH7Q9BTV6 452 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 CLK4Q9HAZ1 481 aaKnown RBP12.94□□□□□ -0.34
VMP1-201ENST00000262291 MYNNQ9NPC7 610 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 DNAJB9Q9UBS3 223 aa12.94□□□□□ -0.34
VMP1-201ENST00000262291 A0A1W2PRB8 838 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 SHISA7A6NL88 538 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 CCNDBP1O95273 360 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 PKLRP30613 574 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 SHMT2P34897 504 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 CAPGP40121 348 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 SNRPNP63162 240 aaKnown RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 PRDX1Q06830 199 aaKnown RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 LRRC32Q14392 662 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 SKIV2LQ15477 1246 aaKnown RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 SLC5A12Q1EHB4 618 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 COL13A1Q5TAT6 717 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms