RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.78□□□□□ -0.2
CUX2-201ENST00000261726 TMEM184CQ9NVA4 438 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 CDH10Q9Y6N8 788 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 MRC1P22897 1456 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 IFNA5P01569 189 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 F8A1P23610 371 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 NIPAL4Q0D2K0 466 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 CYBRD1Q53TN4 286 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 ZNF584Q8IVC4 421 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 CMTM8Q8IZV2 173 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 PIAS4Q8N2W9 510 aaPredicted RBP13.78□□□□□ -0.2
CUX2-201ENST00000261726 OR2AP1Q8NGE2 309 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 TLCD1Q96CP7 247 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 MAN2C1Q9NTJ4 1040 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 NOCTQ9UK39 431 aaKnown RBP13.78□□□□□ -0.2
CUX2-201ENST00000261726 PRELID1Q9Y255 219 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 A0A0A6YYH2 397 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 A6NJ64 397 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 M0R233 179 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 CTHP32929 405 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 GSK3BP49841 420 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 TAS2R43P59537 309 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 IRF2BP1Q8IU81 584 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 CLDN19Q8N6F1 224 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 OR13C3Q8NGS6 347 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 PEX13Q92968 403 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 SHDQ96IW2 340 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 OSBPL7Q9BZF2 842 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 IL21RQ9HBE5 538 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 BORCS7-ASMTA0A0B4J1R7 106 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 HCRTR2O43614 444 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 FOXK1P85037 733 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 CDNFQ49AH0 187 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 NLGN4XQ8N0W4 816 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 ICKQ9UPZ9 632 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 DNMT3AQ9Y6K1 912 aaPredicted RBP13.78□□□□□ -0.2
CUX2-201ENST00000261726 AP1M2Q9Y6Q5 423 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 CLCA1A8K7I4 914 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 ZNF84P51523 738 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 GLT8D1Q68CQ7 371 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 C15orf52Q6ZUT6 534 aaKnown RBP13.78□□□□□ -0.2
CUX2-201ENST00000261726 CPNE8Q86YQ8 564 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 SAMD12Q8N8I0 201 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 BIRC7Q96CA5 298 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 POLE4Q9NR33 117 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 EPHA6Q9UF33 1036 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 SLC7A8Q9UHI5 535 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 TMED5Q9Y3A6 229 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 KDM3BQ7LBC6 1761 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 ZNF850A8MQ14 1090 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 HNRNPKP61978 463 aaKnown RBP eCLIP13.77□□□□□ -0.2
CUX2-201ENST00000261726 PTCHD3Q3KNS1 767 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 ITPRIPL2Q3MIP1 535 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 LRIF1Q5T3J3 769 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 TUBA3EQ6PEY2 450 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 GRASPQ7Z6J2 395 aaPredicted RBP13.77□□□□□ -0.2
CUX2-201ENST00000261726 OR9I1Q8NGQ6 314 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 ZNF599Q96NL3 588 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 HINT2Q9BX68 163 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 ZNF395Q9H8N7 513 aaPredicted RBP13.77□□□□□ -0.2
CUX2-201ENST00000261726 ZNF541Q9H0D2 1346 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 CAPN5O15484 640 aaPredicted RBP13.77□□□□□ -0.2
CUX2-201ENST00000261726 GABBR2O75899 941 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 VNN1O95497 513 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 OAS1P00973 400 aaKnown RBP13.77□□□□□ -0.2
CUX2-201ENST00000261726 CD3GP09693 182 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 POU6F2P78424 691 aaPredicted RBP13.77□□□□□ -0.2
CUX2-201ENST00000261726 NNATQ16517 81 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 ATAD3CQ5T2N8 411 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 GPR157Q5UAW9 335 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 LBX2Q6XYB7 198 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 TMIEQ8NEW7 156 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 C11orf49Q9H6J7 331 aa13.77□□□□□ -0.2
CUX2-201ENST00000261726 TYRP14679 529 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 NAA10P41227 235 aaPredicted RBP13.77□□□□□ -0.21
CUX2-201ENST00000261726 RAB4BP61018 213 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 TRIM74Q86UV6 250 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 ZSCAN1Q8NBB4 408 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 OR4K1Q8NGD4 311 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 POC1BQ8TC44 478 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 MCHR1Q99705 422 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 PIGVQ9NUD9 493 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 EXTL2Q9UBQ6 330 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 TMPRSS11EQ9UL52 423 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 DHDHQ9UQ10 334 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 ASB3Q9Y575 518 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 KCTD3Q9Y597 815 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 HS3ST4Q9Y661 456 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 A6NCN8 305 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 AGAP5A6NIR3 686 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 H3BUI4 141 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 CKMT1AP12532 417 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 NRIP1P48552 1158 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 SPANXN4Q5MJ08 99 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 ELMOD2Q8IZ81 293 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 THRSPQ92748 146 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 EEF1E1O43324 174 aaKnown RBP13.77□□□□□ -0.21
CUX2-201ENST00000261726 GKP32189 559 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 GABRA3P34903 492 aa13.77□□□□□ -0.21
CUX2-201ENST00000261726 ARRB1P49407 418 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms