RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 BRINP2Q9C0B6 783 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 GPR45Q9Y5Y3 372 aa19.59■□□□□ 0.73
RTCA-201ENST00000260563 SGK494L7N484 410 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 PLPP1O14494 284 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 G6PDP11413 515 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 ITGAXP20702 1163 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 SLC9A5Q14940 896 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 RPS6KA2Q15349 733 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 NKAIN1Q4KMZ8 207 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 FAM91A1Q658Y4 838 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 UNQ6494/PRO21346Q6UXR6 183 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 ZNF517Q6ZMY9 492 aaPredicted RBP19.58■□□□□ 0.73
RTCA-201ENST00000260563 LIX1Q8N485 282 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 IL22RA1Q8N6P7 574 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 SNIP1Q8TAD8 396 aaKnown RBP19.58■□□□□ 0.73
RTCA-201ENST00000260563 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.58■□□□□ 0.73
RTCA-201ENST00000260563 RGMAQ96B86 450 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 ROGDIQ9GZN7 287 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 CHST8Q9H2A9 424 aa19.58■□□□□ 0.73
RTCA-201ENST00000260563 IFT80Q9P2H3 777 aaPredicted RBP19.58■□□□□ 0.73
RTCA-201ENST00000260563 ZNF860A6NHJ4 632 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 C9J4A7 227 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 SLC22A2O15244 555 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 TLX3O43711 291 aaPredicted RBP19.57■□□□□ 0.72
RTCA-201ENST00000260563 RDH16O75452 317 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 B3GALT4O96024 378 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 PRPS2P11908 318 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 ADSLP30566 484 aaPredicted RBP19.57■□□□□ 0.72
RTCA-201ENST00000260563 TIA1P31483 386 aaKnown RBP eCLIP19.57■□□□□ 0.725e-6■■■■□ 20.8
RTCA-201ENST00000260563 STAT5AP42229 794 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 SSR2P43308 183 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 TSFMP43897 325 aaKnown RBP19.57■□□□□ 0.72
RTCA-201ENST00000260563 MRPL19P49406 292 aaKnown RBP19.57■□□□□ 0.72
RTCA-201ENST00000260563 ARFIP1P53367 373 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 RAE1P78406 368 aaKnown RBP19.57■□□□□ 0.72
RTCA-201ENST00000260563 BTN3A2P78410 334 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 DSG2Q14126 1118 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 PDCD4Q53EL6 469 aaKnown RBP19.57■□□□□ 0.72
RTCA-201ENST00000260563 GALNT18Q6P9A2 607 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 FAM199XQ6PEV8 388 aaPredicted RBP19.57■□□□□ 0.72
RTCA-201ENST00000260563 CYP20A1Q6UW02 462 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 COMMD6Q7Z4G1 85 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 MIER2Q8N344 545 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 ZNF248Q8NDW4 579 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 NKD1Q969G9 470 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 TBCDQ9BTW9 1192 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 EBPLQ9BY08 206 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 AKIRIN1Q9H9L7 192 aaPredicted RBP19.57■□□□□ 0.72
RTCA-201ENST00000260563 SDR39U1Q9NRG7 319 aaPredicted RBP19.57■□□□□ 0.72
RTCA-201ENST00000260563 WDR70Q9NW82 654 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 GPN3Q9UHW5 284 aaPredicted RBP19.57■□□□□ 0.72
RTCA-201ENST00000260563 DLGAP4Q9Y2H0 992 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 CAPN7Q9Y6W3 813 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 SCN2AQ99250 2005 aa19.57■□□□□ 0.72
RTCA-201ENST00000260563 CAPN14A8MX76 684 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 C1QTNF9BB2RNN3 333 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 RTCAO00442 366 aaKnown RBP19.56■□□□□ 0.72
RTCA-201ENST00000260563 PCDH7O60245 1069 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 C1QTNF9P0C862 333 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 BCKDHAP12694 445 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 CERS1P27544 350 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 MTTPP55157 894 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 KLF10Q13118 480 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 LCN10Q6JVE6 187 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 FAM198BQ6UWH4 519 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 UBE3DQ7Z6J8 389 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 KCNE4Q8WWG9 221 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 SORBS1Q9BX66 1292 aaKnown RBP19.56■□□□□ 0.72
RTCA-201ENST00000260563 ZNF717Q9BY31 904 aaPredicted RBP19.56■□□□□ 0.72
RTCA-201ENST00000260563 MAP4K5Q9Y4K4 846 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 PSMD12O00232 456 aaPredicted RBP19.56■□□□□ 0.72
RTCA-201ENST00000260563 B3GALT2O43825 422 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 ONECUT2O95948 504 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 KLK1P06870 262 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 SDC1P18827 310 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 GPX3P22352 226 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 BSGP35613 385 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 NME5P56597 212 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 OR4C11Q6IEV9 310 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 PAOXQ6QHF9 649 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 ZNF793Q6ZN11 406 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 COX15Q7KZN9 410 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 PAGE2Q7Z2X7 111 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 NUDT13Q86X67 352 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 TREML1Q86YW5 311 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 AMER3Q8N944 861 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 CT55Q8WUE5 264 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 FKBP10Q96AY3 582 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 QRFPRQ96P65 431 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 SERINC2Q96SA4 455 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 YIPF2Q9BWQ6 316 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 PRDM7Q9NQW5 492 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 HCN3Q9P1Z3 774 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 MCM8Q9UJA3 840 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 ADAM29Q9UKF5 820 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 CROTQ9UKG9 612 aa19.56■□□□□ 0.72
RTCA-201ENST00000260563 ANXA4P09525 319 aaPredicted RBP19.55■□□□□ 0.72
RTCA-201ENST00000260563 PCSK2P16519 638 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 TCN2P20062 427 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 HIST1H1TP22492 207 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms