RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 MIEF2Q96C03 454 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 AHCYL2Q96HN2 611 aaKnown RBP16.59■□□□□ 0.25
SRSF1-201ENST00000258962 TEFMQ96QE5 360 aaKnown RBP16.59■□□□□ 0.25
SRSF1-201ENST00000258962 MACROD1Q9BQ69 325 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 DUSP26Q9BV47 211 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 KLHL31Q9H511 634 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 REEP4Q9H6H4 257 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 S100A14Q9HCY8 104 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 FAM120CQ9NX05 1096 aaKnown RBP16.59■□□□□ 0.25
SRSF1-201ENST00000258962 STX18Q9P2W9 335 aaKnown RBP16.59■□□□□ 0.25
SRSF1-201ENST00000258962 USP22Q9UPT9 525 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 ACACBO00763 2458 aa16.58■□□□□ 0.25
SRSF1-201ENST00000258962 OR5K3A6NET4 321 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 C1QTNF9BB2RNN3 333 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 CAPN5O15484 640 aaPredicted RBP16.58■□□□□ 0.24
SRSF1-201ENST00000258962 IL3P08700 152 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 FURINP09958 794 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 C1QTNF9P0C862 333 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 GCKP35557 465 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 PPP1CAP62136 330 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 RPS15AP62244 130 aaKnown RBP16.58■□□□□ 0.24
SRSF1-201ENST00000258962 C2orf80Q0P641 193 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 CAMK2BQ13554 666 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 SLC5A12Q1EHB4 618 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 TMEM35AQ53FP2 167 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 RUNDC3AQ59EK9 446 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 CCNYL2Q5T2Q4 361 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 CPTPQ5TA50 214 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 FBXO42Q6P3S6 717 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 FIGLAQ6QHK4 219 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 IKBIPQ70UQ0 350 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 VN1R4Q7Z5H5 301 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 NUDT13Q86X67 352 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 CLECL1Q8IZS7 167 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 TMEM132CQ8N3T6 1108 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 TRPV3Q8NET8 790 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 DNAJB8Q8NHS0 232 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 RSC1A1Q92681 617 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 CNTNAP3BQ96NU0 1288 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 FCRL4Q96PJ5 515 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 CPPED1Q9BRF8 314 aaPredicted RBP16.58■□□□□ 0.24
SRSF1-201ENST00000258962 CNTNAP3Q9BZ76 1288 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 ALG2Q9H553 416 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 IKZF5Q9H5V7 419 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 HRASLS2Q9NWW9 162 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 ANKMY1Q9P2S6 941 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.58■□□□□ 0.24
SRSF1-201ENST00000258962 ERVK-11Q9UQG0 969 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 PCDHB14Q9Y5E9 798 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 KLK4Q9Y5K2 254 aa16.58■□□□□ 0.24
SRSF1-201ENST00000258962 NUP214P35658 2090 aaPredicted RBP16.57■□□□□ 0.24
SRSF1-201ENST00000258962 A0A0G2JN53 185 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 D6RAR5 112 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 H3BNX3 289 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 TMPRSS11DO60235 418 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 CTSVO60911 334 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 CPNE6O95741 557 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 GSNP06396 782 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 ATP6V1B2P21281 511 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 GPLD1P80108 840 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 SLC34A1Q06495 639 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 PRSS53Q2L4Q9 553 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 MUM1Q2TAK8 710 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 TOR1AIP1Q5JTV8 583 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 USP53Q70EK8 1073 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 PAGE2Q7Z2X7 111 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 OOSP2Q86WS3 158 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 MMP21Q8N119 569 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 AMER3Q8N944 861 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 NXPE2Q96DL1 559 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 MS4A6EQ96DS6 147 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 CENPKQ9BS16 269 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 STRADBQ9C0K7 418 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 NRSN2Q9GZP1 204 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 KLHL25Q9H0H3 589 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 DDX31Q9H8H2 851 aaKnown RBP16.57■□□□□ 0.24
SRSF1-201ENST00000258962 ADAM29Q9UKF5 820 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 PILRAQ9UKJ1 303 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 ATXN7L1Q9ULK2 861 aaPredicted RBP16.57■□□□□ 0.24
SRSF1-201ENST00000258962 AK5Q9Y6K8 562 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 CHD8Q9HCK8 2581 aa16.57■□□□□ 0.24
SRSF1-201ENST00000258962 A0A0A6YYD5 115 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 A0A0J9YY10 115 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 RFXANKO14593 260 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 CASC3O15234 703 aaKnown RBP16.56■□□□□ 0.24
SRSF1-201ENST00000258962 PRAMEF10O60809 474 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 FKBP9O95302 570 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 ANPEPP15144 967 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 PVRP15151 417 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 TYRP1P17643 537 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 EFNA1P20827 205 aaPredicted RBP16.56■□□□□ 0.24
SRSF1-201ENST00000258962 TRPC1P48995 793 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 MAPK12P53778 367 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 PLA2G16P53816 162 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 BNIP2Q12982 314 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 FXNQ16595 210 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 CLPPQ16740 277 aaPredicted RBP16.56■□□□□ 0.24
SRSF1-201ENST00000258962 MPEG1Q2M385 716 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 OR4C11Q6IEV9 310 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 ZNF793Q6ZN11 406 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms